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Report for CCDS31793.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31793.1 Public Homo sapiens 12 C1QL4 24 110 108 CCDS HistoryNCBI Gene:338761Re-query CCDS DB by CCDS ID:31793.1Re-query CCDS DB by GeneID:338761See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31793.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334221.5 ENSP00000335285.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334221.5Link to Ensembl Protein Viewer:ENSP00000335285.3Re-query CCDS DB by Nucleotide ID:ENST00000334221Re-query CCDS DB by Protein ID:ENSP00000335285
Original member Current member NCBI NM_001008223.2 NP_001008224.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001008223.2Link to Protein Sequence:NP_001008224.1Re-query CCDS DB by Nucleotide ID:NM_001008223Re-query CCDS DB by Protein ID:NP_001008224Link to BLAST:NP_001008224.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001008224.1 238 Q86Z23 238 100% 0 0

Chromosomal Locations for CCDS 31793.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 49333054 49333233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49335941 49336477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (717 nt):
ATGGTGCTGCTGCTGCTGGTGGCCATCCCGCTGCTGGTGCACAGCTCCCGCGGGCCAGCGCACTACGAGA
TGCTGGGTCGCTGCCGCATGGTGTGCGACCCGCATGGGCCCCGTGGCCCTGGTCCCGACGGCGCGCCTGC
TTCCGTGCCCCCCTTCCCGCCAGGCGCCAAGGGAGAGGTGGGCCGGCGCGGGAAAGCAGGCCTGCGGGGG
CCCCCTGGACCACCAGGTCCAAGAGGGCCCCCAGGAGAACCCGGCAGGCCAGGCCCCCCGGGCCCTCCCG
GTCCAGGTCCGGGCGGGGTGGCGCCCGCTGCCGGCTACGTGCCTCGCATTGCTTTCTACGCGGGCCTGCG
GCGGCCCCACGAGGGTTACGAGGTGCTGCGCTTCGACGACGTGGTGACCAACGTGGGCAACGCCTACGAG
GCAGCCAGCGGCAAGTTTACTTGCCCCATGCCAGGCGTCTACTTCTTCGCTTACCACGTGCTCATGCGCG
GCGGCGACGGCACCAGCATGTGGGCCGACCTCATGAAGAACGGACAGGTCCGGGCCAGCGCCATTGCTCA
GGACGCGGACCAGAACTACGACTACGCCAGCAACAGCGTCATTCTGCACCTGGACGTGGGCGACGAGGTC
TTCATCAAGCTGGACGGCGGGAAAGTGCACGGCGGCAACACCAACAAGTACAGCACCTTCTCCGGCTTCA
TCATCTACCCCGACTGA

Translation (238 aa):
MVLLLLVAIPLLVHSSRGPAHYEMLGRCRMVCDPHGPRGPGPDGAPASVPPFPPGAKGEVGRRGKAGLRG
PPGPPGPRGPPGEPGRPGPPGPPGPGPGGVAPAAGYVPRIAFYAGLRRPHEGYEVLRFDDVVTNVGNAYE
AASGKFTCPMPGVYFFAYHVLMRGGDGTSMWADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEV
FIKLDGGKVHGGNTNKYSTFSGFIIYPD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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