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Report for CCDS55731.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55731.1 Public Homo sapiens 10 CHST15 24 110 108 CCDS HistoryNCBI Gene:51363Re-query CCDS DB by CCDS ID:55731.1Re-query CCDS DB by GeneID:51363See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55731.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000628426.1 ENSP00000485905.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000628426.1Link to Ensembl Protein Viewer:ENSP00000485905.1Re-query CCDS DB by Nucleotide ID:ENST00000628426Re-query CCDS DB by Protein ID:ENSP00000485905
Original member Current member NCBI NM_001270765.2 NP_001257694.1 Accepted alive Link to Nucleotide Sequence:NM_001270765.2Link to Protein Sequence:NP_001257694.1Re-query CCDS DB by Nucleotide ID:NM_001270765Re-query CCDS DB by Protein ID:NP_001257694Link to BLAST:NP_001257694.1
Original member Current member NCBI NM_014863.4 NP_055678.2 Accepted alive Link to Nucleotide Sequence:NM_014863.4Link to Protein Sequence:NP_055678.2Re-query CCDS DB by Nucleotide ID:NM_014863Re-query CCDS DB by Protein ID:NP_055678Link to BLAST:NP_055678.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001257694.1 506 Q7LFX5-2 506 100% 0 0
NP_055678.2 506 Q7LFX5-2 506 100% 0 0

Chromosomal Locations for CCDS 55731.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 124021082 124021412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124038515 124038671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124042301 124042447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124044580 124044919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124045667 124046212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1521 nt):
ATGAGGCACTGCATTAATTGCTGCATACAGCTGTTACCCGACGGCGCACACAAGCAGCAGGTCAACTGCC
AAGGGGGCCCCCATCACGGTCACCAGGCGTGCCCCACGTGCAAAGGAGAAAACAAAATTCTGTTTCGTGT
GGACAGTAAGCAGATGAACTTGCTTGCTGTTCTCGAAGTGAGGACTGAAGGGAACGAAAACTGGGGTGGG
TTTTTGCGCTTCAAAAAGGGGAAGCGATGTAGCCTCGTTTTTGGACTGATAATAATGACCTTGGTAATGG
CTTCTTACATCCTTTCTGGGGCCCACCAAGAGCTTCTGATCTCATCACCTTTCCATTACGGAGGCTTCCC
CAGCAACCCCAGCTTGATGGACAGCGAAAACCCAAGTGACACAAAGGAGCATCACCACCAATCCTCTGTA
AATAATATTTCATACATGAAGGACTATCCAAGCATTAAATTAATTATCAACAGCATCACAACTAGGATTG
AGTTCACGACCAGACAGCTCCCAGACTTAGAAGACCTTAAGAAGCAGGAGTTGCATATGTTTTCAGTCAT
CCCCAACAAATTCCTTCCAAACAGTAAGAGCCCCTGTTGGTACGAGGAGTTCTCGGGGCAGAACACCACC
GACCCCTACCTCACCAACTCCTACGTGCTCTACTCCAAGCGCTTCCGCTCCACCTTCGACGCCCTGCGCA
AGGCCTTCTGGGGCCACCTGGCGCACGCGCACGGGAAGCACTTCCGCCTGCGCTGCCTGCCGCACTTCTA
CATCATAGGGCAGCCCAAGTGCGGGACCACAGACCTCTATGACCGCCTGCGGCTGCACCCTGAGGTCAAG
TTCTCCGCCATCAAGGAGCCACACTGGTGGACCCGGAAGCGCTTTGGAATCGTCCGCCTAAGAGATGGGC
TGCGAGACCGCTATCCCGTGGAAGATTATCTGGACCTCTTTGACCTGGCCGCACACCAGATCCATCAAGG
ACTGCAGGCCAGCTCTGCAAAGGAGCAGAGCAAGATGAATACAATCATTATCGGGGAGGCCAGTGCCTCC
ACGATGTGGGATAATAATGCCTGGACGTTCTTCTACGACAACAGCACGGATGGCGAGCCACCGTTTCTGA
CGCAGGACTTCATCCACGCCTTTCAGCCAAATGCCAGACTGATTGTCATGCTCAGGGACCCTGTGGAGAG
GTTGTACTCAGACTATCTCTACTTTGCAAGTTCGAATAAATCCGCGGACGACTTCCATGAGAAAGTGACA
GAAGCACTGCAGCTGTTTGAAAATTGCATGCTTGATTATTCACTGCGCGCCTGCGTCTACAACAACACCC
TCAACAACGCCATGCCTGTGTGTACCCCCCCCCCCCGTACCCCCCGAGCTGGCCCCTGGCAGAAGGAGCT
GGTTTGTTGTTATTATGCAAGCGGCATTGTGGGTTTGCGTTTCAGCATAGGAACAGAGAGAAGCGTTTTA
ATGTGCAAATGCTGTTCCCCATTATTCATGGATGTAAAAGCTGAAAACTGA

Translation (506 aa):
MRHCINCCIQLLPDGAHKQQVNCQGGPHHGHQACPTCKGENKILFRVDSKQMNLLAVLEVRTEGNENWGG
FLRFKKGKRCSLVFGLIIMTLVMASYILSGAHQELLISSPFHYGGFPSNPSLMDSENPSDTKEHHHQSSV
NNISYMKDYPSIKLIINSITTRIEFTTRQLPDLEDLKKQELHMFSVIPNKFLPNSKSPCWYEEFSGQNTT
DPYLTNSYVLYSKRFRSTFDALRKAFWGHLAHAHGKHFRLRCLPHFYIIGQPKCGTTDLYDRLRLHPEVK
FSAIKEPHWWTRKRFGIVRLRDGLRDRYPVEDYLDLFDLAAHQIHQGLQASSAKEQSKMNTIIIGEASAS
TMWDNNAWTFFYDNSTDGEPPFLTQDFIHAFQPNARLIVMLRDPVERLYSDYLYFASSNKSADDFHEKVT
EALQLFENCMLDYSLRACVYNNTLNNAMPVCTPPPRTPRAGPWQKELVCCYYASGIVGLRFSIGTERSVL
MCKCCSPLFMDVKAEN


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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