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Report for CCDS7506.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7506.1 Public Homo sapiens 10 TWNK 24 110 108 CCDS HistoryNCBI Gene:56652Re-query CCDS DB by CCDS ID:7506.1Re-query CCDS DB by GeneID:56652See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7506.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311916.8 ENSP00000309595.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311916.8Link to Ensembl Protein Viewer:ENSP00000309595.2Re-query CCDS DB by Nucleotide ID:ENST00000311916Re-query CCDS DB by Protein ID:ENSP00000309595
Original member Current member NCBI NM_021830.5 NP_068602.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021830.5Link to Protein Sequence:NP_068602.2Re-query CCDS DB by Nucleotide ID:NM_021830Re-query CCDS DB by Protein ID:NP_068602Link to BLAST:NP_068602.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_068602.2 684 Q96RR1-1 684 100% 0 0

Chromosomal Locations for CCDS 7506.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 100988211 100989453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100989644 100989884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100990436 100990543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100990869 100991010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100993190 100993510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2055 nt):
ATGTGGGTCCTCCTCCGAAGTGGGTACCCCCTCCGTATCTTGTTACCCCTGCGTGGGGAGTGGATGGGTC
GGAGGGGCCTGCCCCGAAACTTGGCCCCAGGCCCTCCTCGCAGACGTTACAGGAAGGAGACTCTCCAAGC
CTTGGATATGCCAGTGTTGCCTGTAACTGCAACTGAAATCCGCCAGTATTTGCGGGGGCATGGGATCCCC
TTCCAGGATGGTCACAGTTGCCTGCGGGCACTGAGCCCCTTTGCAGAGTCTTCACAGCTCAAAGGCCAGA
CTGGTGTTACCACTTCCTTCAGCCTCTTCATTGACAAGACCACAGGCCACTTTCTCTGCATGACCAGCCT
AGCAGAAGGGAGCTGGGAAGACTTCCAGGCCAGCGTGGAGGGGCGAGGGGATGGGGCCAGGGAGGGGTTT
CTGCTTAGCAAGGCACCAGAATTTGAGGACAGCGAGGAGGTCCGGAGGATCTGGAACCGAGCAATACCTC
TCTGGGAGCTGCCTGATCAGGAGGAGGTTCAGCTGGCTGATACAATGTTTGGCCTTACCAAGGTTACAGA
TGACACACTCAAGCGTTTCAGTGTGCGATATCTGCGACCTGCTCGCAGTCTTGTCTTCCCTTGGTTCTCC
CCTGGGGGCTCAGGATTACGAGGCCTGAAGCTCCTAGAGGCTAAATGCCAGGGGGATGGAGTGAGCTACG
AGGAAACCACTATTCCCCGACCCAGCGCCTACCACAATCTGTTTGGATTACCACTGATTAGTCGTCGAGA
TGCTGAGGTGGTACTGACGAGTCGTGAGCTTGACAGCCTGGCCTTGAACCAGTCCACGGGGCTGCCTACC
CTTACTCTACCCCGAGGAACGACCTGCTTACCCCCTGCCTTACTCCCTTACCTGGAACAGTTCCGGCGGA
TTGTATTCTGGTTGGGGGATGACCTTCGGTCCTGGGAAGCCGCCAAGTTGTTTGCACGAAAACTGAACCC
CAAACGATGCTTCTTGGTGCGACCAGGAGACCAGCAACCCCGTCCCCTGGAGGCCCTGAACGGAGGCTTC
AATCTTTCTCGTATTCTTCGTACCGCCCTGCCTGCCTGGCACAAGTCCATCGTATCTTTCCGGCAGCTTC
GGGAGGAGGTGCTAGGAGAACTGTCAAATGTGGAGCAAGCAGCTGGCCTCCGCTGGAGCCGCTTTCCAGA
CCTCAATCGTATCTTGAAGGGACATCGAAAGGGCGAGCTGACGGTCTTCACAGGGCCAACAGGCAGTGGA
AAGACGACATTCATCAGTGAGTATGCCCTGGATTTGTGTTCCCAGGGGGTGAACACACTGTGGGGTAGCT
TCGAGATCAGCAATGTGAGACTAGCCCGGGTCATGCTGACACAGTTTGCCGAGGGGCGGCTGGAAGATCA
ACTGGACAAATATGATCACTGGGCTGACCGCTTTGAGGACCTGCCCCTCTATTTCATGACTTTCCATGGA
CAGCAAAGCATCAGGACTGTAATAGATACAATGCAACATGCAGTCTACGTCTATGACATTTGTCATGTGA
TCATCGACAACCTGCAGTTCATGATGGGTCACGAGCAGCTGTCCACAGACAGGATCGCAGCTCAAGACTA
CATCATCGGGGTCTTTCGGAAGTTTGCAACAGACAATAACTGCCATGTGACACTGGTCATTCACCCCCGG
AAAGAGGATGATGACAAGGAACTGCAGACAGCGTCCATTTTTGGCTCAGCCAAAGCAAGCCAGGAAGCAG
ACAATGTTCTGATCCTGCAGGACAGGAAGCTGGTAACCGGGCCAGGGAAACGGTATCTGCAGGTGTCCAA
GAACCGCTTTGATGGAGATGTAGGTGTCTTCCCGCTTGAGTTCAACAAGAACTCCCTCACCTTCTCCATT
CCACCAAAGAACAAGGCCCGGCTCAAGAAGATCAAGGATGACACTGGACCAGTGGCCAAAAAGCCCTCTT
CTGGCAAAAAGGGGGCTACGACACAGAACTCTGAGATTTGCTCAGGCCAGGCCCCCACTCCCGACCAGCC
AGACACCTCCAAGCGTTCAAAGTGA

Translation (684 aa):
MWVLLRSGYPLRILLPLRGEWMGRRGLPRNLAPGPPRRRYRKETLQALDMPVLPVTATEIRQYLRGHGIP
FQDGHSCLRALSPFAESSQLKGQTGVTTSFSLFIDKTTGHFLCMTSLAEGSWEDFQASVEGRGDGAREGF
LLSKAPEFEDSEEVRRIWNRAIPLWELPDQEEVQLADTMFGLTKVTDDTLKRFSVRYLRPARSLVFPWFS
PGGSGLRGLKLLEAKCQGDGVSYEETTIPRPSAYHNLFGLPLISRRDAEVVLTSRELDSLALNQSTGLPT
LTLPRGTTCLPPALLPYLEQFRRIVFWLGDDLRSWEAAKLFARKLNPKRCFLVRPGDQQPRPLEALNGGF
NLSRILRTALPAWHKSIVSFRQLREEVLGELSNVEQAAGLRWSRFPDLNRILKGHRKGELTVFTGPTGSG
KTTFISEYALDLCSQGVNTLWGSFEISNVRLARVMLTQFAEGRLEDQLDKYDHWADRFEDLPLYFMTFHG
QQSIRTVIDTMQHAVYVYDICHVIIDNLQFMMGHEQLSTDRIAAQDYIIGVFRKFATDNNCHVTLVIHPR
KEDDDKELQTASIFGSAKASQEADNVLILQDRKLVTGPGKRYLQVSKNRFDGDVGVFPLEFNKNSLTFSI
PPKNKARLKKIKDDTGPVAKKPSSGKKGATTQNSEICSGQAPTPDQPDTSKRSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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