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Report for CCDS44465.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44465.1 Public Homo sapiens 10 DNTT 24 110 108 CCDS HistoryNCBI Gene:1791Re-query CCDS DB by CCDS ID:44465.1Re-query CCDS DB by GeneID:1791See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44465.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000630152.1 ENSP00000486733.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000630152.1Link to Ensembl Protein Viewer:ENSP00000486733.1Re-query CCDS DB by Nucleotide ID:ENST00000630152Re-query CCDS DB by Protein ID:ENSP00000486733
Original member Current member NCBI NM_001017520.2 NP_001017520.1 Accepted alive Link to Nucleotide Sequence:NM_001017520.2Link to Protein Sequence:NP_001017520.1Re-query CCDS DB by Nucleotide ID:NM_001017520Re-query CCDS DB by Protein ID:NP_001017520Link to BLAST:NP_001017520.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001017520.1 508 P04053-2 508 100% 0 0

Chromosomal Locations for CCDS 44465.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 96304498 96304700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96318352 96318526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96319262 96319390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96320618 96320788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96322657 96322728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96324266 96324389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96327468 96327600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96328725 96328830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96332351 96332596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96335894 96335974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96338138 96338224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1527 nt):
ATGGATCCACCACGAGCGTCCCACTTGAGCCCTCGGAAGAAGAGACCCCGGCAGACGGGTGCCTTGATGG
CCTCCTCTCCTCAAGACATCAAATTTCAAGATTTGGTCGTCTTCATTTTGGAGAAGAAAATGGGAACCAC
CCGCAGAGCGTTCCTCATGGAGCTGGCCCGCAGGAAAGGGTTCAGGGTTGAAAATGAGCTCAGTGATTCT
GTCACCCACATCGTAGCAGAGAACAACTCGGGTTCGGATGTTCTGGAGTGGCTTCAAGCACAGAAAGTAC
AAGTCAGCTCACAACCAGAGCTCCTCGATGTCTCCTGGCTGATCGAATGCATAAGAGCAGGGAAACCGGT
GGAAATGACAGGAAAACACCAGCTTGTTGTGAGAAGAGACTATTCAGATAGCACCAACCCAGGCCCCCCG
AAGACTCCACCAATTGCTGTACAAAAGATCTCCCAGTATGCGTGTCAGAGAAGAACCACTTTAAACAACT
GTAACCAGATATTCACGGATGCCTTTGATATACTGGCTGAAAACTGTGAGTTTAGAGAAAATGAAGACTC
CTGTGTGACATTTATGAGAGCAGCTTCTGTATTGAAATCTCTGCCATTCACAATCATCAGTATGAAGGAC
ACAGAAGGAATTCCCTGCCTGGGGTCCAAGGTGAAGGGTATCATAGAGGAGATTATTGAAGATGGAGAAA
GTTCTGAAGTTAAAGCTGTGTTAAATGATGAACGATATCAATCCTTCAAACTCTTTACTTCTGTATTTGG
AGTGGGGCTGAAGACTTCTGAGAAGTGGTTCAGGATGGGTTTCAGAACTCTGAGTAAAGTAAGGTCGGAC
AAAAGCCTGAAATTTACACGAATGCAGAAAGCAGGATTTCTGTATTATGAAGACCTTGTCAGCTGTGTGA
CCAGGGCAGAAGCAGAGGCCGTCAGTGTGCTGGTTAAAGAGGCTGTCTGGGCATTTCTTCCGGATGCTTT
CGTCACCATGACAGGAGGGTTCCGGAGGGGTAAGAAGATGGGGCATGATGTAGATTTTTTAATTACCAGC
CCAGGATCAACAGAGGATGAAGAGCAACTTTTACAGAAAGTGATGAACTTATGGGAAAAGAAGGGATTAC
TTTTATATTATGACCTTGTGGAGTCAACATTTGAAAAGCTCAGGTTGCCTAGCAGGAAGGTTGATGCTTT
GGATCATTTTCAAAAGTGCTTTCTGATTTTCAAATTGCCTCGTCAAAGAGTGGACAGTGACCAGTCCAGC
TGGCAGGAAGGAAAGACCTGGAAGGCCATCCGTGTGGATTTAGTTCTGTGCCCCTACGAGCGTCGTGCCT
TTGCCCTGTTGGGATGGACTGGCTCCCGGTTTGAGAGAGACCTCCGGCGCTATGCCACACATGAGCGGAA
GATGATTCTGGATAACCATGCTTTATATGACAAGACCAAGAGGATATTCCTCAAAGCAGAAAGTGAAGAA
GAAATTTTTGCGCATCTGGGATTGGATTATATTGAACCGTGGGAAAGAAATGCCTAG

Translation (508 aa):
MDPPRASHLSPRKKRPRQTGALMASSPQDIKFQDLVVFILEKKMGTTRRAFLMELARRKGFRVENELSDS
VTHIVAENNSGSDVLEWLQAQKVQVSSQPELLDVSWLIECIRAGKPVEMTGKHQLVVRRDYSDSTNPGPP
KTPPIAVQKISQYACQRRTTLNNCNQIFTDAFDILAENCEFRENEDSCVTFMRAASVLKSLPFTIISMKD
TEGIPCLGSKVKGIIEEIIEDGESSEVKAVLNDERYQSFKLFTSVFGVGLKTSEKWFRMGFRTLSKVRSD
KSLKFTRMQKAGFLYYEDLVSCVTRAEAEAVSVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVDFLITS
PGSTEDEEQLLQKVMNLWEKKGLLLYYDLVESTFEKLRLPSRKVDALDHFQKCFLIFKLPRQRVDSDQSS
WQEGKTWKAIRVDLVLCPYERRAFALLGWTGSRFERDLRRYATHERKMILDNHALYDKTKRIFLKAESEE
EIFAHLGLDYIEPWERNA


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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