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Report for CCDS23320.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23320.1 Public Mus musculus 9 Ccnb2 23 108 98 CCDS HistoryNCBI Gene:12442Re-query CCDS DB by CCDS ID:23320.1Re-query CCDS DB by GeneID:12442See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23320.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034742.7 ENSMUSP00000034742.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034742.7Link to Ensembl Protein Viewer:ENSMUSP00000034742.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000034742Re-query CCDS DB by Protein ID:ENSMUSP00000034742
Original member Current member NCBI NM_007630.2 NP_031656.2 Accepted alive Link to Nucleotide Sequence:NM_007630.2Link to Protein Sequence:NP_031656.2Re-query CCDS DB by Nucleotide ID:NM_007630Re-query CCDS DB by Protein ID:NP_031656Link to BLAST:NP_031656.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031656.2 398 P30276 398 100% 0 0

Chromosomal Locations for CCDS 23320.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 70407919 70408029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70409280 70409390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70410121 70410261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70410655 70410891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70412842 70413000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70413102 70413272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70418794 70418907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70419001 70419129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70421417 70421440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1197 nt):
ATGGCGCTGCTCCGACGCCCGACGGTGTCCAGTGATTTGAAGAATATTGACACAGAAGTTATTCCTAAAG
CCAAGAGCCATGTGACTATCCGGCGGGCAGTTTTAGAAGAAATTGGAAATAAAGTTAGAAACAGAACCAC
TCAGGTGGCGAAGAAACCTCAGAACACCAAAGTACCAGCTCTGCCCACCAAAGTGACAAATGTCAACAAG
CAGCCGAAACCCACAGCCTCTGTGAAACCAGTGCAGATGGAGGCGCTAGCTCCCAAGGATCGTCCTCCCG
CCCCTGAGGATGTCTCCATGAAGGAAGAGAGCCTCTGCCAAGCTTTCTCTGATGCTCTGCTCTGCAAGAT
CGAGGACATAGATAACGAGGACAGGGAGAACCCTCAGCTCTGCAGTGACTACGTGAAGGACATCTACCAG
TACCTCAGGCAGCTTGAGGTTTTACAGTCCATTAATCCACACTTCTTAGATGGAAGAGATATAAATGGAC
GTATGCGTGCCATCCTGGTGGACTGGCTGGTCCAAGTCCATTCCAAGTTTCGGCTTCTGCAGGAAACTCT
GTACATGTGCATTGCCATCATGGACCGGTTCCTGCAGGCTCAGCTGGTCTGCCGGAAGAAACTGCAGCTG
GTCGGGATCACAGCTCTGCTCCTGGCTTCCAAATATGAGGAGATGTTTTCTCCAAATATCGAAGACTTTG
TTTATATCACAGATAATGCTTACACCAGTTCCCAAATCCGAGAAATGGAGACTCTGATTTTGAAAGAGTT
GAAATTTGAGTTGGGCCGACCTTTGCCACTTCACTTCTTAAGGCGAGCCTCAAAAGCCGGAGAGGTGGAT
GTTGAACAGCACACTTTAGCCAAGTACCTGATGGAGCTGACGCTCGTCGACTATGACATGGTGCACTACC
ATCCTTCTCAGGTGGCAGCCGCTGCCTCTTGCCTGTCTCAGAAGGTGCTGGGCCAAGGAAAATGGAATTT
GAAGCAGCAGTATTACACAGGCTACATGGAGAGTGAAGTCCTGGAAGTCATGCAGCACATGGCCAAGAAC
GTTGTGAAAGTCAATGACAACCGTACCAAGTTCATCGCTGTCAAGAACAAGTATGCCAGCAGCAGACTCC
TGAAGATCAGCACGATCCCTCAGCTGAACTCCAAAATCATCAAAGACCTGGCCTCCCCTCTGCTGGGCAG
CCCCTAG

Translation (398 aa):
MALLRRPTVSSDLKNIDTEVIPKAKSHVTIRRAVLEEIGNKVRNRTTQVAKKPQNTKVPALPTKVTNVNK
QPKPTASVKPVQMEALAPKDRPPAPEDVSMKEESLCQAFSDALLCKIEDIDNEDRENPQLCSDYVKDIYQ
YLRQLEVLQSINPHFLDGRDINGRMRAILVDWLVQVHSKFRLLQETLYMCIAIMDRFLQAQLVCRKKLQL
VGITALLLASKYEEMFSPNIEDFVYITDNAYTSSQIREMETLILKELKFELGRPLPLHFLRRASKAGEVD
VEQHTLAKYLMELTLVDYDMVHYHPSQVAAAASCLSQKVLGQGKWNLKQQYYTGYMESEVLEVMQHMAKN
VVKVNDNRTKFIAVKNKYASSRLLKISTIPQLNSKIIKDLASPLLGSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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