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Report for CCDS22654.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
22654.1 |
Public |
Mus musculus |
8 |
Pkd1l3 |
23 |
108 |
98 |
          |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 22654.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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 |
 |
EBI |
ENSMUST00000057344.2 |
ENSMUSP00000051512.2 |
Accepted |
alive |
      |
 |
 |
NCBI |
NM_181544.3 |
NP_853522.2 |
Accepted |
alive |
        |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_853522.2 |
2151 |
Q2EG98-8 |
2151 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 22654.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6456 nt): ATGCTCTTGCAGAGGCGGTCCTGGCTCTGGCTGTACATTAGAATCGGTGTCATTCTGGGTGATATTTTGG GACGTAAACCAAGCATCCGGGAGCAACATGGGGGAAACAGCTGCTATCAGCTTAACAGACTTTTCTGTGA CTTCCAGGAAGCAGATAACTACTGCCACGCCCAGAGAGGACGCCTAGCCCACACGTGGAACCCCAAGCTT CGGGGTTTCCTAAAAAGCTTCCTGAATGAAGAAACAGTGTGGTGGGTCAGGGGAAACCTGACGCTGCCCG GATCGCATCCAGGGATAAATCAGACAGGAGGTGATGACGTCTTAAGGAACCAAAAGCCTGGCGAGTGCCC TTCCGTGGTCACACACTCTAATGCTGTCTTCTCAAGATGGAACCTGTGCATAGAGAAGCATCATTTCATT TGCCAGGCTGCCGCCTTTCCCCCTCAAGGTGCAAGCATTTGGAGAAATGAGTTTGGTCCTGGTCCTCTGT TACCCATGAAAAGAAGAGGAGCTGAGACAGAGAGACATATGATCCCAGGAAATGGCCCCCCGTTAGCCAT GTGTCACCAACCCGCTCCTCCTGAGCTTTTTGAGACATTGTGCTTTCCCATTGACCCAGCTTCTTCAGCA CCTCCAAAAGCCACACACAGGATGACAATCACATCCCTAACTGGAAGGCCACAGGTGACATCAGACACAC TTGCATCCAGCAGCCCACCACAGGGGACATCAGACACACCTGCATCCAGCAGCCCACCACAGGTGACATC AGCCACATCTGCATCTAGCAGCCCACCACAGGGGACATCAGACACACCTGCATCCAGCAGCCCACCACAG GTGACATCAGCCACATCTGCATCTAGCAGCCCACCACAGGGGACATCAGACACACCTGCATCCAGCAGCC CACCACAGGTGACATCAGCCACATCTGCATCTAGCAGCCCACCACAGGGGACATCAGACACACCTGCATC CAGCAGCCCACCACAGGTGACATCAGCCACATCTGCATCTAGCAGCCCACCACAGGGGACATCAGACACA CCTGCATCCAGCAGCCCACCACAGGGGACATTAGACACACCTTCATCTAGCAGCCCACCACAGGGGACAT CAGACACACCTGCATCCAGCAGCCCACCACAGGGGACATCAGAGACACCTGCATCCAACAGCCCACCACA GGGGACATCAGAGACACCTGGATTCAGCAGCCCACCACAGGTGACAACAGCCACACTTGTATCCAGCAGC CCACCACAGGTGACATCAGAGACACCTGCATCCAGCAGCCCAACACAGGTGACATCAGAGACACCTGCAT CCAGCAGCCCAACACAGGTGACATCAGACACACCTGCATCCAATAGCCCACCACAGGGGACATCAGACAC ACCTGGATTCAGCAGCCCAACACAGGTGACAACAGCCACACTTGTATCCAGCAGCCCACCACAGGTGACA TCAGACACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGACACACCTGCATCCAGCAGCCCACCAC AGGTGACATCAGAGACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGACACATCTGCATCCATCAG CCCACCACAGGTAATATCAGACACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGAGACACCTGCA TCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACA CACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCACCATGGCCTGT TATAACAGAGGTCACCAGGCCTGAATCCACAATACCTGCTGGAAGATCTTTGGCAAACATCACTTCAAAG GCACAGGAAGACTCTCCCCTGGGAGTCATCTCTACCCATCCACAGATGTCATTTCAGAGTTCAACCAGTC AGGCCTTGGATGAGACAGCAGGGGAACGGGTCCCAACAATTCCTGATTTCCAAGCCCACAGTGAATTCCA GAAAGCTTGTGCCATCCTCCAGAGACTGAGAGACTTCCTGCCGACTTCTCCCACATCAGCTCAGGTCAGT GTGGCCAATTTACTCATTGACCTGAGTGAGCAGTTGCTGGTGCTCCCGTTTCAGAAGAACAACAGTTGGA GCTCTCAAACTCCAGCAGTCAGCTGCCCCTTCCAGCCTCTTGGACGTCTAACAACAACGGAAAAAAGCAG TCATCAGATGGCTCAGCAAGACATGGAACAGGTTGAAGACATGCTGGAGACATCCCTGATGGCCCTGGGG GAGATCCACAGAGCATTTTGCCAGCAGAGTCTGTGCCCTCAGTCAGCAGTGACCCTGGCCTCTCCCTCTG CTACTCTGATGTTGAGCAGCCAAAATGTGTCAACGTTGCCCCTGAGCACCTACACTTTGGGTGAGCCTGC ACCCTTGACTTTGGGCTTCCCGTCAGCAGAAGCTCTGAAGGAGCTCTTGAACAAACACCCAGGCGTGAAC CTTCAAGTGACAGGTCTGGCTTTCAACCCTTTTAAGACTTTGGATGACAAGAACATTGTTGGAAGCATTG GAAATGTGCAGCTGAGCTCTGCTTATCAGTCGATCAGAGTCCACGACTTAATAGAAGATATTGAGATCAT GCTCTGGAGAAATGCCAGCATGGAGACCCAGCCCACCAGCCTCAACACAAGTACAGACCATTTCACAATC TCTGTGAACATCACTTCCTTGGAGAAGACCCTCATTGTGACCATCGAGCCTGAAAGTCCCCTCCTAATGA CGCTCCACTTGGGCTTCCAGGACCAGCTGGCCCACACTCACTTCTATCTCAACATCAGCCTGCCAAGGGA CCAAGTGTGGCAGAAAGATGAGGAGTACACGTGGGTGCTGACACCAGAGAACCTGTGGTACGGGACTGGC ACCTACTACATAATGGCTGTGGAGAATAAAAGTACAGAGGCGGCACAGCACACACCCGTCCTGGTCTCAG TGGTCACAGCTGTCACCCAGTGCTATTTCTGGGACCGATACAATAGGACATGGAAGAGCGATGGATGCCA AGTGGGGCCGAAGAGCACCATTTTAAAGACACAGTGTCTCTGTGACCACCTGACCTTCTTCAGCAGCGAC TTCTTCATCGTGCCGAGGACGGTGGATGTAGAAAACACCATCAAACTGCTTCTTCATGTGACCAACAACC CTGTCGGGGTGTCATTGCTGTCCAGCCTCCTAGGATTCTATATCCTCTTAGCCATGTGGGCTTCCAGAAA GGATCGAGAAGATATGCAGAAGGTGAAGGTAACAGTCCTGGCTGACAATGACCCCAGCTCTGCATCCCAC TACCTTATCCAGGTCTACACTGGCTATCGGAGGAGGGCTGCTACCACCGCCAAGGTCGTTATCACTCTCT ATGGCTCAGAGGGGCACAGTGAGCCCCACCACCTTTGTGACCCTGAGAAGACAGTTTTTGAGCGTGGAGC ACTGGATGTTTTCCTTCTTTCCACCGGATCCTGGCTGGGGGACCTGCATGGCCTTCGGCTGTGGCATGAC AATTCTGGCGACAGCCCTTCTTGGTATGTAAGCCAGGTGATCGTCAGTGACATGACCACGAGGAAGAAAT GGCATTTCCAGTGCAATTGTTGGCTGGCCGTGGACTTGGGCAACTGTGAGCGTGACAGGGTGTTCACACC AGCCTCCAGAAGCGAGCTCTCTTCCTTCAGACACCTGTTCTCCTCCACAATCGTAGAAAAGTTCACCCAG GATTATCTGTGGCTCTCAGTTGCAACTCGACATCCCTGGAACCAGTTTACACGAGTCCAGAGGCTCTCCT GCTGCATGGCACTACTGCTCTGTGACATGGTCATCAATATTATGTTCTGGAAGATGGGTGGCACCACTGC CAAGAGGGGCACCGAACAACTAGGTCCACTTGCTGTGACCTTGTCGGAGCTGCTCGTCAGCATCCAGACC TCCATCATCCTCTTCCCCATCCACCTCATCTTTGGGCGGCTCTTCCAGTTGATTCACCCACCAGAAGCTC TGCCCCAGCTTCCTTTCATCCAGGCTGCCTGGCCCCCTGCTCTTGTTTGTGAGTCCCCCTCTCTTACACA GGTGGTCAAGGAATTAAAGGAAACTGTGGGATTCCTGCTCAGGAGAAATACACAGCTGCTCTCGGAGTGT GAGCCGTCTTCGTGCAGTTCTTGTGACATTAACAAGCTGGCGAAGCTTTTATCCGGCCTCATTTACTGTC ACTTAGAAGACGAAGGCTGTCACCAGCAGACAGAATCCCACTGGGAAGACGCAGTGTCTGAAAACCATTA CCATTTCTGCCGCTACCTTCTCCAACTTCTGCGGAGACTGAAAGCGCATTTAGAGGCTCTTGGTGCTACC CAGGATCACCAGTCTTGTGATTTCTCAGAAGCAGTCAGCCAACTTCAAAACCTCCAGGAACTCCTGGAGA CACAGACTCTCCGCAGAGGGCCAGGGCCATGCAGGCATTCCACCAGTTTCCCCATCCTCAGCCCAGGAGA AGGGAAGAAGCCCATGTCATTTTGCCTGTTCAGATGGTTGAAGTGCAGCTGCTGGCTCCTTCTTGGTGTC ATCAGCCTGGCCTCGGCCTTTTTTATAACGCTCTATAGCTTGGAGTTGGACAAAGACCAAGCCACCAGCT GGGTTATTTCAATGATGCTGTCGGTACTACAAGACATCTTTATCAGCCAGCCGATAAAGGTCATCTTCCT GACATTGTTGTTCTCCCTGATGGCAAACCACATGCCGTGGCTTAACAAAGACAAGGAACAACACGCCCGG AGAATCGTAGCACTTTGGGCAAAGTGTCCTTGGTCGGCACCTGGCTTGAGAGACAAGAACAATCCCATCT ACACTGCCCCAGCAATGAACAACCTAGCCAAGCCTACAAGGAAGGCCTGGAAGAAGCAGCTCTCCAAGCT GACGGGTGGTACTCTGGTGCAAATCCTCTTCCTGACCCTGCTGATGACTACCGTCTATTCTGCAAAGGAC TCTAGTCGATTTTTCCTCCATCGAGCTATCTGGAAGAGGTTTTCTCACCGTTTCTCAGAAATCAAAACTG TAGAGGATTTCTACCCCTGGGCCAACGGCACCCTCCTTCCTAACCTATATGGGGATTACAGAGGATTTAT TACTGACGGGAACTCCTTTCTTCTGGGCAATGTTTTGATCCGCCAGACTCGCATTCCTAATGACATATTC TTCCCAGGATCTCTCCACAAGCAAATGAAGTCGCCTCCCCAACATCAGGAGGACAGAGAGAACTATGGGG CTGGCTGGGTCCCCCCTGACACAAACATCACAAAAGTAGACAGTATTTGGCATTATCAGAATCAGGAGTC GCTGGGAGGCTATCCCATCCAAGGGGAGCTAGCCACTTACTCAGGAGGAGGCTATGTTGTGAGGCTTGGA AGAAACCACAGTGCGGCAACCAGGGTTCTGCAGCATCTGGAACAGAGGCGCTGGCTGGACCACTGCACAA AAGCCCTCTTTGTAGAATTCACGGTCTTCAATGCTAATGTGAATCTGCTCTGTGCGGTGACCCTCATCTT GGAATCCAGTGGTGTGGGGACTTTCCTCACCTCCCTGCAACTGGACAGTTTAACTTCCCTTCAGTCATCA GAGAGGGGCTTCGCCTGGATCGTCTCACAGGTCGTCTACTACCTTCTCGTCTGTTACTATGCCTTCATCC AGGGCTGTCGGCTGAAGCGGCAGAGGCTGGCGTTCTTCACTAGGAAAAGGAACCTCCTGGACACAAGCAT CGTCCTCATTAGCTTCAGCATCCTGGGCCTCAGCATGCAGAGCCTCTCTCTACTTCACAAAAAGATGCAG CAGTACCACTGTGACCGGGACAGGTTCATCAGTTTCTACGAGGCACTGAGAGTGAACTCTGCAGTCACCC ACCTCAGGGGCTTCCTGCTTCTCTTCGCAACTGTGCGGGTCTGGGACCTACTGCGACATCATGCCCAGTT ACAGGTCATCAACAAGACACTGTCCAAAGCCTGGGACGAGGTGCTGGGCTTTATACTGATCATCGTGGTC CTGTTAAGCAGCTATGCCATGACTTTCAACCTGCTGTTTGGATGGAGCATCTCTGACTACCAGAGCTTCT TCAGATCTATAGTGACTGTTGTTGGCCTCTTGATGGGAACTTCAAAGCACAAGGAGGTTATTGCTCTATA CCCAATCCTGGGCTCCCTTTTGGTTCTCAGTAGCATCATCTTGATGGGACTTGTGATCATTAATCTTTTT GTTTCTGCCATTCTCATTGCCTTTGGGAAAGAAAGGAAGGCCTGTGAGAAAGAAGCTACACTGACAGATA TGTTACTACAAAAGCTCTCAAGTCTGTTAGGAATCCGCCTGCACCAGAATCCATCTGAGGAACACGCTGA CAACACTGGGTATTGA
Translation (2151 aa): MLLQRRSWLWLYIRIGVILGDILGRKPSIREQHGGNSCYQLNRLFCDFQEADNYCHAQRGRLAHTWNPKL RGFLKSFLNEETVWWVRGNLTLPGSHPGINQTGGDDVLRNQKPGECPSVVTHSNAVFSRWNLCIEKHHFI CQAAAFPPQGASIWRNEFGPGPLLPMKRRGAETERHMIPGNGPPLAMCHQPAPPELFETLCFPIDPASSA PPKATHRMTITSLTGRPQVTSDTLASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQ VTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDT PASSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSS PPQVTSETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVT SDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPA SSSPTNMTSDTPASSSPTNMTSDTPASSSPTNMTSDTPASSSPPWPVITEVTRPESTIPAGRSLANITSK AQEDSPLGVISTHPQMSFQSSTSQALDETAGERVPTIPDFQAHSEFQKACAILQRLRDFLPTSPTSAQVS VANLLIDLSEQLLVLPFQKNNSWSSQTPAVSCPFQPLGRLTTTEKSSHQMAQQDMEQVEDMLETSLMALG EIHRAFCQQSLCPQSAVTLASPSATLMLSSQNVSTLPLSTYTLGEPAPLTLGFPSAEALKELLNKHPGVN LQVTGLAFNPFKTLDDKNIVGSIGNVQLSSAYQSIRVHDLIEDIEIMLWRNASMETQPTSLNTSTDHFTI SVNITSLEKTLIVTIEPESPLLMTLHLGFQDQLAHTHFYLNISLPRDQVWQKDEEYTWVLTPENLWYGTG TYYIMAVENKSTEAAQHTPVLVSVVTAVTQCYFWDRYNRTWKSDGCQVGPKSTILKTQCLCDHLTFFSSD FFIVPRTVDVENTIKLLLHVTNNPVGVSLLSSLLGFYILLAMWASRKDREDMQKVKVTVLADNDPSSASH YLIQVYTGYRRRAATTAKVVITLYGSEGHSEPHHLCDPEKTVFERGALDVFLLSTGSWLGDLHGLRLWHD NSGDSPSWYVSQVIVSDMTTRKKWHFQCNCWLAVDLGNCERDRVFTPASRSELSSFRHLFSSTIVEKFTQ DYLWLSVATRHPWNQFTRVQRLSCCMALLLCDMVINIMFWKMGGTTAKRGTEQLGPLAVTLSELLVSIQT SIILFPIHLIFGRLFQLIHPPEALPQLPFIQAAWPPALVCESPSLTQVVKELKETVGFLLRRNTQLLSEC EPSSCSSCDINKLAKLLSGLIYCHLEDEGCHQQTESHWEDAVSENHYHFCRYLLQLLRRLKAHLEALGAT QDHQSCDFSEAVSQLQNLQELLETQTLRRGPGPCRHSTSFPILSPGEGKKPMSFCLFRWLKCSCWLLLGV ISLASAFFITLYSLELDKDQATSWVISMMLSVLQDIFISQPIKVIFLTLLFSLMANHMPWLNKDKEQHAR RIVALWAKCPWSAPGLRDKNNPIYTAPAMNNLAKPTRKAWKKQLSKLTGGTLVQILFLTLLMTTVYSAKD SSRFFLHRAIWKRFSHRFSEIKTVEDFYPWANGTLLPNLYGDYRGFITDGNSFLLGNVLIRQTRIPNDIF FPGSLHKQMKSPPQHQEDRENYGAGWVPPDTNITKVDSIWHYQNQESLGGYPIQGELATYSGGGYVVRLG RNHSAATRVLQHLEQRRWLDHCTKALFVEFTVFNANVNLLCAVTLILESSGVGTFLTSLQLDSLTSLQSS ERGFAWIVSQVVYYLLVCYYAFIQGCRLKRQRLAFFTRKRNLLDTSIVLISFSILGLSMQSLSLLHKKMQ QYHCDRDRFISFYEALRVNSAVTHLRGFLLLFATVRVWDLLRHHAQLQVINKTLSKAWDEVLGFILIIVV LLSSYAMTFNLLFGWSISDYQSFFRSIVTVVGLLMGTSKHKEVIALYPILGSLLVLSSIILMGLVIINLF VSAILIAFGKERKACEKEATLTDMLLQKLSSLLGIRLHQNPSEEHADNTGY
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