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Report for CCDS52592.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52592.1 Public Mus musculus 8 Or2z8 23 108 98 CCDS HistoryNCBI Gene:404315Re-query CCDS DB by CCDS ID:52592.1Re-query CCDS DB by GeneID:404315See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52592.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000093434.4 ENSMUSP00000132724.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000093434.4Link to Ensembl Protein Viewer:ENSMUSP00000132724.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000093434Re-query CCDS DB by Protein ID:ENSMUSP00000132724
Original member Current member EBI ENSMUST00000215324.1 ENSMUSP00000149288.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000215324.1Link to Ensembl Protein Viewer:ENSMUSP00000149288.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000215324Re-query CCDS DB by Protein ID:ENSMUSP00000149288
Original member Current member NCBI NM_207555.2 NP_997438.1 Accepted alive Link to Nucleotide Sequence:NM_207555.2Link to Protein Sequence:NP_997438.1Re-query CCDS DB by Nucleotide ID:NM_207555Re-query CCDS DB by Protein ID:NP_997438Link to BLAST:NP_997438.1

Chromosomal Locations for CCDS 52592.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 72057682 72058626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGGGGACTTCAAATGTGTCATCAAATTCAGATTTCATCCTCATGGGGCTCTTCAGCTACACAGGGCCCC
ATCTTGTCTTGTTCTTCCTCATGGCCACCGTGTTCATCATTGGCCTGCTAGGCAACACCACCCTGCTTTT
TCTGATTGCCACAGACTCCAGGCTCCACACACCCATGTACTTCCTGCTCAGCCAACTCTCACTTCTGGAT
GTCGGCTTCCCACTGGTTACCATCCCCAAAGTGGTGGCTGAGTTCCTGCAAGGACAGAATGTCATAAGCT
TTGGGGGATGTGCCACTCAGATGTTCTTCCTCATGCTCATGGGTGTCTCTGAGGGTGTCCTTCTGTCCCT
CATGTCTTATGACCGCTACGTGGCCGTATGCCACCCCCTGCATTACCAGGTGCTCATGAGAAACCAAGTG
TGTCTGGTGATGGTGGGTGCATCCTGGTTCTCAGGTGCCTTGGTGGCATCCATCCAGACCTCCATCACCC
TGCAGTTCCCTTACTGTGCCTCACACACCGTGGACCACTTCTTCTGTGAGCTGCCAGCTCTCCTCAAGCT
GTCATGTGCAGACACATCAGCCTATGAGTTGGCGCTCTCCATCTCTGGGGTGCTGATCTTACTGCTACCC
CTGTCTCTCATCTTCATTTCCTACGGCCACGTTCTGGGAGCTGTACTGCACATGCGGTCAGCTGAAGCTA
GACACAAGGCTTTCACCACGTGCTCCTCACATGTGACTGTAGTGGGTCTCTTTTATGGGGCAGCTGTATT
CATGTACATGGTCCCAGGCAGCTACCACAGCCCAAAACAGGATAACGTTGTATCCCTTTTCTATAGCCTC
ATCACCCCTACCCTCAACCCCCTCATCTACAGCTTGAGAAACAGAGAAGTTCGAATGTCCTTGGTCAAGG
TTATGGGCAGGTCTGATTTCAGGGTGAAGCGATGA

Translation (314 aa):
MGTSNVSSNSDFILMGLFSYTGPHLVLFFLMATVFIIGLLGNTTLLFLIATDSRLHTPMYFLLSQLSLLD
VGFPLVTIPKVVAEFLQGQNVISFGGCATQMFFLMLMGVSEGVLLSLMSYDRYVAVCHPLHYQVLMRNQV
CLVMVGASWFSGALVASIQTSITLQFPYCASHTVDHFFCELPALLKLSCADTSAYELALSISGVLILLLP
LSLIFISYGHVLGAVLHMRSAEARHKAFTTCSSHVTVVGLFYGAAVFMYMVPGSYHSPKQDNVVSLFYSL
ITPTLNPLIYSLRNREVRMSLVKVMGRSDFRVKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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