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Report for CCDS52407.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52407.1 Public Mus musculus 7 Zfp764l1 23 108 98 CCDS HistoryNCBI Gene:101604Re-query CCDS DB by CCDS ID:52407.1Re-query CCDS DB by GeneID:101604See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52407.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000165495.1 ENSMUSP00000126288.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000165495.1Link to Ensembl Protein Viewer:ENSMUSP00000126288.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000165495Re-query CCDS DB by Protein ID:ENSMUSP00000126288
Original member Current member NCBI NM_198011.2 NP_932128.2 Accepted alive Link to Nucleotide Sequence:NM_198011.2Link to Protein Sequence:NP_932128.2Re-query CCDS DB by Nucleotide ID:NM_198011Re-query CCDS DB by Protein ID:NP_932128Link to BLAST:NP_932128.2

Chromosomal Locations for CCDS 52407.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 127391428 127392515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127393001 127393114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127393253 127393436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1386 nt):
ATGGCGCCGCGGATGGCCCCGGAAAGGGCCTCCGCTTGGCCTGCATTCCTTAAGCCTGGGACTGTGAGCT
TCGCGGACGTGGCCGTGTACTTCTCCCCGGAGGAGTGGAGGTGTCTGCGGCCGGCGCAGAGAACCCTGTA
CCGAGAGGTGATGCGCGAGACCTATGGTCTCCTGGCCTCTCTGGAAGTCGGGGGCGACAAACCAGCGCTC
ATCTGCTGGGTGGAGGAAGAGTCCGAAGTGTGGGGACCCGGTGCCCAGGAGCCAGAGGTGGCCATGTGCA
GGACAGAAGTCCACTCAGATTGCAGGCACGAGAAGGAAGGGAAGAGACCAAGGGAAGAGACCAAGGCAAC
CAAGAAGATACTTTCTCCAGAAGCTGGGCCTATGGAGCCACGCCCCTCCTTTGCTTCCCCTTCTTGCAAC
TTGGAGCTGCTTTTCAAGAACTCTCAGCAGGGGCACCCCACTGTTGCGGTGCACAACCCTATCCTAAAAG
CAGACCAGCGTCATGGGTGCCATGTGTGTGGGAAGAGTTTTGCCCACCAGTCCAAACTGGTGGAGCACCT
GTACACTCACACAGGTGAAAAGCCATTTCAGTGCCCAGACTGCGACAAGTATTTCGGCCGGGCTTCTTCC
CTGAGCATGCATCGAGCCATACACCGAGGGGAACGGCCGCATCAGTGTCCTGACTGTGGGAAGAGTTTTA
CCCAGCGGTCCACATTGGTGGCGCACATGTACACTCACACAGGCGAAAAGCCGTTCCATTGCCCTGACTG
CAACAAATCTTTCAGCCGGCCTTCTTCCCTGAGCTCTCACCGGGCCATACACAGAGGGGAACGGCCTCAT
TGTTGCTCTGACTGTGGCCGAGCTTTCACGCATCGCTCTGGCCTCATTGCCCATCTCCGTGTCCACACTG
GGGAGAAGCCTTACTGTTGTGCTGATTGTGGACGCTGCTTCAGCCAGAGCTCTGGGCTCCGTGAGCACCA
GCGGGTGGTACACAGCGGTGTGACCCCCTTCACTTGCACTCACTGCGGCAGAGCCTTTGCCCGGGCCGCA
TATCTTCAGTGTCACATGCGCACCCACACGGGTGAAAAGCCTTATTCATGCCCTGACTGTGGACGCTGCT
TTCGACAGAGCTCTGACATGGCAGCCCACAGGCGGACCCACAGTGGTGAACGACCCTACCCCTGCCCTCA
GTGTGGCAGACGCTTTCCCACGAAGTCAGCTGTGACAAAGCACCAGTGGGTCCATAGACCAGGAGCTAAA
GGCCATAAGGACAAAAAATTCAGTCAGTTATCTATATCCCTAGACCCTAGCCAAGAGGACCCGGATCCAC
CTGTGGGCTTCCAACATTATCCAGAGATATTCCAGGAGTGTGGGGGATGGTCTTAA

Translation (461 aa):
MAPRMAPERASAWPAFLKPGTVSFADVAVYFSPEEWRCLRPAQRTLYREVMRETYGLLASLEVGGDKPAL
ICWVEEESEVWGPGAQEPEVAMCRTEVHSDCRHEKEGKRPREETKATKKILSPEAGPMEPRPSFASPSCN
LELLFKNSQQGHPTVAVHNPILKADQRHGCHVCGKSFAHQSKLVEHLYTHTGEKPFQCPDCDKYFGRASS
LSMHRAIHRGERPHQCPDCGKSFTQRSTLVAHMYTHTGEKPFHCPDCNKSFSRPSSLSSHRAIHRGERPH
CCSDCGRAFTHRSGLIAHLRVHTGEKPYCCADCGRCFSQSSGLREHQRVVHSGVTPFTCTHCGRAFARAA
YLQCHMRTHTGEKPYSCPDCGRCFRQSSDMAAHRRTHSGERPYPCPQCGRRFPTKSAVTKHQWVHRPGAK
GHKDKKFSQLSISLDPSQEDPDPPVGFQHYPEIFQECGGWS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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