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Report for CCDS20893.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20893.1 Public Mus musculus 7 Gpr4 23 108 98 CCDS HistoryNCBI Gene:319197Re-query CCDS DB by CCDS ID:20893.1Re-query CCDS DB by GeneID:319197See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20893.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000060225.5 ENSMUSP00000061243.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000060225.5Link to Ensembl Protein Viewer:ENSMUSP00000061243.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000060225Re-query CCDS DB by Protein ID:ENSMUSP00000061243
Original member Current member NCBI NM_175668.4 NP_783599.1 Accepted alive Link to Nucleotide Sequence:NM_175668.4Link to Protein Sequence:NP_783599.1Re-query CCDS DB by Nucleotide ID:NM_175668Re-query CCDS DB by Protein ID:NP_783599Link to BLAST:NP_783599.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_783599.1 365 Q8BUD0 365 100% 0 0

Chromosomal Locations for CCDS 20893.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 19222155 19223252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1098 nt):
ATGGACAACAGCACGGGCACAGGGGAGGGCTGCCATGTGGACTCTCGAGTGGACCACCTCTTCCCACCAT
CTCTCTACATCTTCGTCATCGGGGTGGGGCTGCCCACCAACTGCCTGGCCCTGTGGGCAGCCTACCGGCA
GGTGCGCCAACACAATGAGCTGGGCGTCTACCTGATGAACTTGAGCATTGCAGACCTGCTGTACATCTGC
ACTTTGCCGCTGTGGGTCGACTACTTCCTCCACCATGACAACTGGATCCACGGCCCTGGCTCCTGCAAGC
TCTTTGGCTTCATCTTCTACAGCAACATCTATATCAGCATCGCCTTCCTGTGCTGCATCTCCGTGGACCG
CTACCTGGCTGTGGCTCATCCTCTGCGCTTTGCACGCCTGCGCCGGGTCAAGACAGCAGTGGCTGTGAGC
TCTGTGGTCTGGGCCACGGAGCTGGGCGCCAATTCAGCACCGCTCTTCCATGATGAGCTGTTTCGTGATC
GCTACAACCACACCTTCTGCTTTGAGAAGTTCCCCATGGAGCGTTGGGTGGCCTGGATGAATCTGTACCG
CGTCTTTGTGGGCTTCCTCTTCCCCTGGGCACTCATGTTGCTGTGCTACCGTGGCATCCTGAGGGCAGTG
CAGAGCAGTGTGTCCACCGAGCGCCAGGAGAAAGTCAAGATCAAACGTCTGGCCCTGAGCCTCATCGCCA
TTGTGCTGGTGTGCTTTGCGCCTTACCATGCTCTCCTGCTGTCTCGCAGCGCCGTCTACCTGGGCCGGCC
CTGGGACTGTGGCTTCGAGGAGCGAGTCTTTTCTGCCTACCACAGCTCCCTGGCCTTCACCAGCCTCAAT
TGTGTGGCTGACCCCATCCTCTACTGCCTGGTCAACGAGGGTGCCCGCAGTGATGTGGCCAAGGCCCTGC
ACAACCTCCTCCGCTTCCTGGCCAGCAACAAGCCCCAGGAGATGGCCAATGCTTCCCTCACCCTGGAGAC
ACCCTTGACCTCCAAGAGGAGCACCACCGGCAAGTCGTCCGGGGCTGTCTGGGCAGTGCCTCCGACTGCC
CAGGGGGACCAGGTGCCACTGAAGGTGCTGCTGCCCCCGGCACAGTGA

Translation (365 aa):
MDNSTGTGEGCHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQVRQHNELGVYLMNLSIADLLYIC
TLPLWVDYFLHHDNWIHGPGSCKLFGFIFYSNIYISIAFLCCISVDRYLAVAHPLRFARLRRVKTAVAVS
SVVWATELGANSAPLFHDELFRDRYNHTFCFEKFPMERWVAWMNLYRVFVGFLFPWALMLLCYRGILRAV
QSSVSTERQEKVKIKRLALSLIAIVLVCFAPYHALLLSRSAVYLGRPWDCGFEERVFSAYHSSLAFTSLN
CVADPILYCLVNEGARSDVAKALHNLLRFLASNKPQEMANASLTLETPLTSKRSTTGKSSGAVWAVPPTA
QGDQVPLKVLLPPAQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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