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Report for CCDS84862.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84862.1 Public Mus musculus 5 Dnajc5g 23 108 98 CCDS HistoryNCBI Gene:231098Re-query CCDS DB by CCDS ID:84862.1Re-query CCDS DB by GeneID:231098See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84862.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000201740.3 ENSMUSP00000144137.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000201740.3Link to Ensembl Protein Viewer:ENSMUSP00000144137.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000201740Re-query CCDS DB by Protein ID:ENSMUSP00000144137
Original member Current member NCBI NM_001347324.1 NP_001334253.1 Accepted alive Link to Nucleotide Sequence:NM_001347324.1Link to Protein Sequence:NP_001334253.1Re-query CCDS DB by Nucleotide ID:NM_001347324Re-query CCDS DB by Protein ID:NP_001334253Link to BLAST:NP_001334253.1

Chromosomal Locations for CCDS 84862.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 31108890 31109002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 31109495 31109708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 31111604 31111696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (420 nt):
ATGCCTCTTACGTATGACGCAACCCAGCGACTATCTAGAACTGGGAAAAGCCTCTATGCAGTGCTGGAAC
TGAAGAAGGGTGCTGAGACTGCAGACATCAAAAAAGCCTACAGGAAACTGGCCTTGCAATATCATCCAGA
CAAGAATCCAGATAACCCTTTAGCAGCAGAAATCTTCAAAGAGATCAACACAGCCCATGCCATACTCACC
GACCCTACAAAAAAGAAGATCTATGACCGGCACGGCTCACTAGGATTATACCTGTATGACCATTTTGGTG
AAGAAGGTGTCCGATTCTATTTTATAGTGAACAGTTGTTGGTTCAAGGTGCTGGCCCAGCAAGAGTCCCC
GACACTCAGCCCACTGGATACATTGAAGAAGGAAGAAAGTAGCCCTGTCTCTACACTCACCCAGATTTGA

Translation (139 aa):
MPLTYDATQRLSRTGKSLYAVLELKKGAETADIKKAYRKLALQYHPDKNPDNPLAAEIFKEINTAHAILT
DPTKKKIYDRHGSLGLYLYDHFGEEGVRFYFIVNSCWFKVLAQQESPTLSPLDTLKKEESSPVSTLTQI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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