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Report for CCDS71524.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
71524.1 Public Mus musculus 4 H6pd 23 108 98 CCDS HistoryNCBI Gene:100198Re-query CCDS DB by CCDS ID:71524.1Re-query CCDS DB by GeneID:100198See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 71524.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000084117.12 ENSMUSP00000081134.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000084117.12Link to Ensembl Protein Viewer:ENSMUSP00000081134.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000084117Re-query CCDS DB by Protein ID:ENSMUSP00000081134
Original member Current member NCBI NM_001291004.1 NP_001277933.1 Accepted alive Link to Nucleotide Sequence:NM_001291004.1Link to Protein Sequence:NP_001277933.1Re-query CCDS DB by Nucleotide ID:NM_001291004Re-query CCDS DB by Protein ID:NP_001277933Link to BLAST:NP_001277933.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001277933.1 789 Q8CFX1 789 100% 0 0

Chromosomal Locations for CCDS 71524.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 149981558 149982921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149983903 149984172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149994469 149994586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149995745 149996362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2370 nt):
ATGCTCCTAGCGGCAATGTGCTTGGCCCTTCTGGGCTGCCTACAGGCGCAGGAACTCAAGGGTCATGTTT
CCATAATCCTGCTGGGAGCAACCGGGGACCTAGCTAAAAAGTACCTGTGGCAGGGACTGTTTCAGCTATA
CCTGGATGAGGCTGGGAAGGGCCACAGTTTCAGCTTCCACGGTGCTGCCCTGACAGCCCCCCAGCAAGGC
CAGAAGCTCATGGACAAGGTCTTGGAATCCCTCTCCTGTCCCAAGGACTTGGTACCCAGTCGCTGTGATG
AACTCAAGGGTCAGTTTCTACAGCTGAGCCAATACCGCCAGCTGAAGACAGTGGAGGACTATCAGACCCT
CAACAAGGATATTGAGACCCAGGTCCAGCAGGATGGGCTCTGGGAGGCAGGCAGGATCTTCTACTTCAGT
GTGCCGCCCTTTGCCTACGCAGACATTGCCCGTAACATCAACAGCAGCTGCCGACCACACCCAGGTGCCT
GGCTACGGGTTGTTTTTGAAAAACCCTTTGGCCATGACCACCTCTCAGCCCAGCAGCTGGCTTCAGAACT
TGGGAGCTTTTTCCAGGAGGAGGAGATGTACCGTGTGGATCATTACCTCGGCAAGCAGGCGGTGGCTCAG
ATCCTGCCCTTCCGAGATCAGAACCGCAAGGCCTTGGATGGCCTCTGGAACAGGCACCATGTGGAGCGGG
TGGAGATCATCTTGAAGGAGACCATAGATGCGGAAGGTCGGGCCAGTTTCTATGAGGAGTATGGCGTCAT
CCGTGACACGCTGCAGAACCACCTGACTGAGATCCTCACGCTGGTGGCCATGGAACTGCCTCTCAACATC
AGCAGCTCAGCCGCCGTGCTCCAGCATAAGCTCTGGGCCTTCCAGGCCCTGCGGGGGCTGCAGAAGAGCA
GTGCCATCCTGGGCCAGTACCAGGCCTACAGCGGACAGGTGCGCCGAGAGCTGCAGAAGCCAGACGGCTT
CCAGAGCCTGACACCAACCTTCGCAGGTGTCCTTGTCCACATCGACAACCTGCGCTGGGAGGGTGTCCCT
TTCATCCTGATGTCTGGCAAGGCCTTGGATGAGAGAGTGGGCTATGTTCGGATTGTGTTTAAGAATCGGG
CGTACTGCACCCAGAGCGAGAGACACTGGGTGCCGGAGCAGAGCCGGTGCCTGCCCCAGCAGATTATCTT
CTACATTGGACACGGTGAGCTGGGCCACCCTGCCATTCTGGTCAGCCGGAACCTGTTCAAACCCTCACTA
CCCACTCAGAAGTGGAAGGAGGTGCAGGACCAGCCTGGGCTCCGCCTGTTCGGCCGTCCTCTGTCTGATT
ACTACGCCTACAGGCCTGTGCGGGAGCAAGACGCCTACTCCACCCTCCTGTCGCACATCTTCCACTGCCG
AAAGGAGTCCTTCATCACCACAGAGAACCTCTTGGCCTCCTGGGTCTTCTGGACCCCGTTACTGGACAGC
CTGGCCTTTGAAGTTCCACGCCCATACCCAGGGGGAGCCGAGAATGGCCAGCTGCTGGACTTTGAGTTTA
GCGGTGGTCAGCTGACCTTCTCCCAGCAGCAGCTGGAGGTGCTGATACCAGATCTAGGCTCAGTCCCAAA
GCCCAGTGACTTCCAGGTCCTCGGGGCCCGGTATAGACAGAGCCCACTGATTACCGCCTGGCCAGAGGAG
CTGATCTCTAAGCTGGCCAGTGACATTGAAGCCGCCGCGGTGCAGGCAGTACGGCACTTCGGCAAGTTCC
ACCTGGCACTGTCAGGTGGTTCGAGCCCCATAGCTCTCTTCCAGCAGCTGGCCACAGGACATTACAGCTT
CCCCTGGGCCCACACACACCTCTGGCTGGTTGATGAGCGTTGTGTCCCTCTCTCAGATCCAGACTCCAAC
TTCCAGGGCCTGCAGGCTCACCTGCTACAGCACGTCAGGGTACCCTACTACAACATCCACCCGATGCCAG
TGCACCTGCACCAGCGGCTCTGTGCCGAGGAGGACCAGGGAGCTCAGACCTATGCCAGTGAGATCTCAGC
CCTGGTGGCCAACAGCAGCTTCGACCTGGTGCTCCTGGGCATGGGCACCGACGGGCACACAGCTTCTCTG
TTCCCACAGTCCCCCACAGGCCTGGATGGTGATCAGCTGGTGGTGCTGACGGAGAGCCCGTTCAGGCCAC
ACCAACGCATGAGCCTCAGCCTGCCCCTCATCAACCGAGCCAAGAAGGTAGCTGTCCTGGTCATGGGCAG
GACAAAACGTGAGATCACAACGTTGGTGAGCCGCGTGGGCCATGAACCCAAGAAGTGGCCCATCTCAGGT
GTGGTGCCTCTTTCTGGGCAGCTGGTTTGGTACATGGATTACGAGGCCTTTCTGGGATGA

Translation (789 aa):
MLLAAMCLALLGCLQAQELKGHVSIILLGATGDLAKKYLWQGLFQLYLDEAGKGHSFSFHGAALTAPQQG
QKLMDKVLESLSCPKDLVPSRCDELKGQFLQLSQYRQLKTVEDYQTLNKDIETQVQQDGLWEAGRIFYFS
VPPFAYADIARNINSSCRPHPGAWLRVVFEKPFGHDHLSAQQLASELGSFFQEEEMYRVDHYLGKQAVAQ
ILPFRDQNRKALDGLWNRHHVERVEIILKETIDAEGRASFYEEYGVIRDTLQNHLTEILTLVAMELPLNI
SSSAAVLQHKLWAFQALRGLQKSSAILGQYQAYSGQVRRELQKPDGFQSLTPTFAGVLVHIDNLRWEGVP
FILMSGKALDERVGYVRIVFKNRAYCTQSERHWVPEQSRCLPQQIIFYIGHGELGHPAILVSRNLFKPSL
PTQKWKEVQDQPGLRLFGRPLSDYYAYRPVREQDAYSTLLSHIFHCRKESFITTENLLASWVFWTPLLDS
LAFEVPRPYPGGAENGQLLDFEFSGGQLTFSQQQLEVLIPDLGSVPKPSDFQVLGARYRQSPLITAWPEE
LISKLASDIEAAAVQAVRHFGKFHLALSGGSSPIALFQQLATGHYSFPWAHTHLWLVDERCVPLSDPDSN
FQGLQAHLLQHVRVPYYNIHPMPVHLHQRLCAEEDQGAQTYASEISALVANSSFDLVLLGMGTDGHTASL
FPQSPTGLDGDQLVVLTESPFRPHQRMSLSLPLINRAKKVAVLVMGRTKREITTLVSRVGHEPKKWPISG
VVPLSGQLVWYMDYEAFLG


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
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