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Report for CCDS88737.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
88737.1 Public Mus musculus 15 6030458C11Rik 23 108 98 CCDS HistoryNCBI Gene:77877Re-query CCDS DB by CCDS ID:88737.1Re-query CCDS DB by GeneID:77877See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 88737.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000227299.1 ENSMUSP00000154605.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000227299.1Link to Ensembl Protein Viewer:ENSMUSP00000154605.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000227299Re-query CCDS DB by Protein ID:ENSMUSP00000154605
Original member NCBI NM_001357761.1 NP_001344690.1 Updated not alive Link to Nucleotide Sequence:NM_001357761.1Link to Protein Sequence:NP_001344690.1Re-query CCDS DB by Nucleotide ID:NM_001357761Re-query CCDS DB by Protein ID:NP_001344690
Current member NCBI NM_001357761.2 NP_001344690.1 Accepted alive Link to Nucleotide Sequence:NM_001357761.2Link to Protein Sequence:NP_001344690.1Re-query CCDS DB by Nucleotide ID:NM_001357761Re-query CCDS DB by Protein ID:NP_001344690Link to BLAST:NP_001344690.1

Chromosomal Locations for CCDS 88737.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 12810712 12810844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 12811933 12812072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 12814191 12814257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 12815850 12815971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 12816320 12816382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 12817858 12818284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 12821404 12821528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1077 nt):
ATGCCTGCAGTTTACGCTGGCCATTTTTCTCAAGTAATCTGGCTCCACCCCACGTGGGCCCAGCAAATCA
GGGAGGGCAAGCACTGCTTCTTAGTAGGCAAAGACATTTCTACCACAACCATCAGGGTTACAAGTACAGA
TTCTTACTTCCTAAGTGATGGTCTGTTTGTACCTGAAGACCAGCTAGAGAACCGAAGGCCCTTACAGTTA
GATGTGATTCTGGTAGAACCTTACACACTCTGTAGCAAACAAGATGACAGTGACTCTGTGTCTTCTACAA
AGAAGCCCAAGCTGGCACTGGGAAGTGGAGAGAGCAGCGCTGCGGCTGATGGGCACTCTTGCTCAGAAGG
ACGTCGAGGAGACGCAGTGACACCAAGAAGTGACCATGCTTGCCAGGAGCCGTCCTGCTCACGTTCCGGA
GGTCAGCAGAGCCAGAACACAGCCACCGCTGGGGCGATTCTGGACATACTGAAGACGGGAGATGCGTTTG
TTTTAGATATTGACTTGGATTTTTTTTCTGTCAAAAACCCCTTCAAAGAAATGTTCACTCAGGATGAATA
CAAAATTCTACAGGAGCTTTACCAGTTTAAAAAGCCTGATAGTAACCTTCCTGAGGATGGTTTGGTGGAT
GTTGTTGAGGCTCGAACCCATCAGTTGGAAGATTTAGAAGCAGTCTTTGCTGACTTGTGTGACGGTGATA
GTGAAGAAACCGTACAGAGCTGGGCTTCAAACCCTGGGATGGAGTCACTAGTTCCACTTGTACAGAGTTT
GAAAAAACGGATGGAAGTACCAGACTATGAAATGGTCCACCAGGCTGGGCTAACTTGCGATTATTCAGAA
CTTCCTCATCATATCAGCACAGAAGAAGAAATTGAGTATCTTATTCAGTCTGTGTATTTTCTATTAAAAA
GTCTACCAAAACCTACTCTTGTGACAATTGCAAGGTCAAGTCTGGATGATTACTGTCCTCCGGAACAAGT
TGACATGATTCAGGGAAAGGTCCTCGATGTGCTGCACTCACTCTACGGGACCCTGGACACTCACCTGGTG
TACTCAGAAGAGTCCCCTCTGAGCTGA

Translation (358 aa):
MPAVYAGHFSQVIWLHPTWAQQIREGKHCFLVGKDISTTTIRVTSTDSYFLSDGLFVPEDQLENRRPLQL
DVILVEPYTLCSKQDDSDSVSSTKKPKLALGSGESSAAADGHSCSEGRRGDAVTPRSDHACQEPSCSRSG
GQQSQNTATAGAILDILKTGDAFVLDIDLDFFSVKNPFKEMFTQDEYKILQELYQFKKPDSNLPEDGLVD
VVEARTHQLEDLEAVFADLCDGDSEETVQSWASNPGMESLVPLVQSLKKRMEVPDYEMVHQAGLTCDYSE
LPHHISTEEEIEYLIQSVYFLLKSLPKPTLVTIARSSLDDYCPPEQVDMIQGKVLDVLHSLYGTLDTHLV
YSEESPLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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