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Report for CCDS24092.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24092.1 Public Mus musculus 10 Pwp1 23 108 98 CCDS HistoryNCBI Gene:103136Re-query CCDS DB by CCDS ID:24092.1Re-query CCDS DB by GeneID:103136See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24092.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000001836.10 ENSMUSP00000001836.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000001836.10Link to Ensembl Protein Viewer:ENSMUSP00000001836.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000001836Re-query CCDS DB by Protein ID:ENSMUSP00000001836
Original member Current member NCBI NM_133993.3 NP_598754.2 Accepted alive Link to Nucleotide Sequence:NM_133993.3Link to Protein Sequence:NP_598754.2Re-query CCDS DB by Nucleotide ID:NM_133993Re-query CCDS DB by Protein ID:NP_598754Link to BLAST:NP_598754.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598754.2 501 Q99LL5 501 100% 0 0

Chromosomal Locations for CCDS 24092.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 85871943 85872014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 85874278 85874336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 85874449 85874633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 85876298 85876383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 85876486 85876582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 85878479 85878589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 85879262 85879392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 85879830 85879891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 85882003 85882099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 85882871 85882932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 85884463 85884574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 85885610 85885700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 85885797 85885918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 85887223 85887328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 85888030 85888142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1506 nt):
ATGAACCGCAGCCGCCAAGTGACCTGCGTGGCCTGGGTCCGCCGCGGCGTGGCCAAAGAGACTCCAGACA
AGGTAGAGCTAAGTAAAGAGGAAGTGAACCGTCTCATCGCTGAAGCAAAAGGAAAGTTGCAAGAAGAAGG
TGGGAGTGAAGAAGAGGAGGCAGGCAACCCTTCAGAAGATGGCATGCAGAGTGGCCCGACCCAGGCACCG
CCTAGGGAGTCCCTGGAGGATGGGGATCCACAAGATGACCGCACACTGGACGATGACGAGCTGGCGGGGT
ACGACTTAGATAATTATGACGAAGAGGATAACCCAGATGCTGAGACCATTGGCGAGTCTCTGTTGGGTCT
TACGGTCTATGGCAGTAATGACCAGGATCCATATGTCACCTTGAAAGACACGGAACAATATGAGCATGAA
GATTTCTTGATTAAGCCGACTGACAACCTCATCGTTTGTGGCCGTGCTGAACAAGAGCAGTGCAATCTAG
AGGTGCACGTTTACAATCAAGAAGAGGAGTCTTTCTACGTCCACCATGACATACTCCTGTCTGCATACCC
TCTGAGTGTGGAATGGCTGAATTTTGATCCTAGCCCAGATGCATCTACTGGGAATTACATTGCTGTGGGA
AACATGACTCCTGTCATCGAGGTATGGGACCTGGATATAGTGGACTCTCTAGAACCAGTCTTCACACTGG
GAAGCAAGCTTTCCAAAAAGAAGAAGAAGAAAGGGAAGAAGAGTTCCTCAGCAGAAGGACATACTGATGC
TGTCCTTGACCTATCCTGGAATAAGACAGTCAGAAATGTGCTTGCAAGTGCATCGGCAGACAGCACTGTA
GTTCTCTGGGATCTGTCTGTGGGGAAGTCAGTAGCCAGGCTTACTGCACATACAGACAAGGTTCAGACTC
TGCAGTTTCATCCATTTGAAGCACAGACTCTGATTTCTGGGTCCTATGACAAATCGGTGGCTCTGTATGA
CTGCAGAGATCCCAGCCAGAACCACCGCCAGTGGCGGTTCAGTGGGCAGATCGAGAGAGTGACCTGGAAC
CACTTCTCACCGTGTCATTTCTTGGCCAGTACAGATGATGGCTTTGTCTATAACCTGGATGCACGTTCAG
ACAAGCCAATCTTTACACTTAATGCACACAACGATGAAATCTCTGGTCTTGATCTTAGCAGTCAGATCAA
AGGCTGCCTTGTGACTGCTTCCGCTGACAAATTTGTGAAGATCTGGGACATCTTAGGAGATAGGCCAAGT
CTCATTCACTCTAGAGACATGAAAATGGGAGTTCTCTTTTGTTCCTCCTGCTGTCCTGACTTGCCATTTG
TTTATGCCTTTGGAGGACAGAAAGAAGGGCTTCGGGTTTGGGACATAAGCACTGTGTCTTCAGTAAATGA
AGCATTTGGAAGACGGGAGCGACTCGTTATAGGCGGCACGAAAGGTTTATCTGTTAGCGGCCCCTGTGGG
AGCAGGAGTCCACAGCAGACACCAATGGAGTCCTGA

Translation (501 aa):
MNRSRQVTCVAWVRRGVAKETPDKVELSKEEVNRLIAEAKGKLQEEGGSEEEEAGNPSEDGMQSGPTQAP
PRESLEDGDPQDDRTLDDDELAGYDLDNYDEEDNPDAETIGESLLGLTVYGSNDQDPYVTLKDTEQYEHE
DFLIKPTDNLIVCGRAEQEQCNLEVHVYNQEEESFYVHHDILLSAYPLSVEWLNFDPSPDASTGNYIAVG
NMTPVIEVWDLDIVDSLEPVFTLGSKLSKKKKKKGKKSSSAEGHTDAVLDLSWNKTVRNVLASASADSTV
VLWDLSVGKSVARLTAHTDKVQTLQFHPFEAQTLISGSYDKSVALYDCRDPSQNHRQWRFSGQIERVTWN
HFSPCHFLASTDDGFVYNLDARSDKPIFTLNAHNDEISGLDLSSQIKGCLVTASADKFVKIWDILGDRPS
LIHSRDMKMGVLFCSSCCPDLPFVYAFGGQKEGLRVWDISTVSSVNEAFGRRERLVIGGTKGLSVSGPCG
SRSPQQTPMES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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