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Report for CCDS15024.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15024.1 Public Mus musculus 1 Myl1 23 108 98 CCDS HistoryNCBI Gene:17901Re-query CCDS DB by CCDS ID:15024.1Re-query CCDS DB by GeneID:17901See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15024.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027151.11 ENSMUSP00000027151.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027151.11Link to Ensembl Protein Viewer:ENSMUSP00000027151.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000027151Re-query CCDS DB by Protein ID:ENSMUSP00000027151
Original member NCBI NM_021285.3 NP_067260.1 Updated not alive Link to Nucleotide Sequence:NM_021285.3Link to Protein Sequence:NP_067260.1Re-query CCDS DB by Nucleotide ID:NM_021285Re-query CCDS DB by Protein ID:NP_067260
Current member NCBI NM_021285.4 NP_067260.1 Accepted alive Link to Nucleotide Sequence:NM_021285.4Link to Protein Sequence:NP_067260.1Re-query CCDS DB by Nucleotide ID:NM_021285Re-query CCDS DB by Protein ID:NP_067260Link to BLAST:NP_067260.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067260.1 188 P05977-1 188 100% 0 0

Chromosomal Locations for CCDS 15024.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 66925037 66925065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66926208 66926285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66926534 66926707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66930186 66930329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66934246 66934273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66944792 66944905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (567 nt):
ATGGCACCAAAGAAAGACGTGAAGAAGCCCGCTGCTGCGCCTGCCCCAGCCCCGGCCCCGGCCCCTGCCC
CA
GCCAAACCTAAGGAAGAAAAAATCGATCTGTCTGCTATTAAGATCGAGTTCTCTAAGGAGCAACAGGA
G
GACTTCAAGGAGGCATTTCTCCTGTTTGACAGAACAGGTGAATGCAAGATCACCTTAAGTCAGGTGGGA
GAC
GTCCTCCGGGCTCTGGGCACCAATCCCACCAATGCAGAGGTCAAGAAGGTTCTTGGGAACCCCAGCA
AT
GAAGAGATGAATGCTAAGAAAATCGAGTTTGAACAGTTTCTGCCCATGATGCAAGCTATCTCCAACAA
C
AAGGACCAGGGAGGTTATGAAGATTTCGTTGAGGGTCTGCGTGTCTTCGACAAGGAGGGCAATGGCACC
GTC
ATGGGTGCTGAACTCCGCCATGTCCTCGCCACTCTGGGAGAGAAGATGAAGGAGGAAGAGGTAGAAG
CG
TTGCTGGCAGGCCAGGAGGACTCCAATGGCTGCATCAACTATGAAGCTTTTGTCAAACACATCATGTC
T
GTCTAA


Translation (188 aa):
MAPKKDVKKPAAAPAPAPAPAPAPAKPKEEKIDLSAIKIEFSKEQQEDFKEAFLLFDRTGECKITLSQVG
D
VLRALGTNPTNAEVKKVLGNPSNE
EMNAKKIEFEQFLPMMQAISNNKDQGGYEDFVEGLRVFDKEGNGT
V
MGAELRHVLATL
GEKMKEEEVEALLAGQEDSNGCINYEAFVKHIMSV



Links Key
 Links to:   History report
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 Genome Browser Links:   Ensembl Genome Browser
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