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Report for CCDS46044.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46044.1 Public Homo sapiens 19 ZNF30 24 110 108 CCDS HistoryNCBI Gene:90075Re-query CCDS DB by CCDS ID:46044.1Re-query CCDS DB by GeneID:90075See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46044.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000303586.11 ENSP00000303889.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000303586.11Link to Ensembl Protein Viewer:ENSP00000303889.7Re-query CCDS DB by Nucleotide ID:ENST00000303586Re-query CCDS DB by Protein ID:ENSP00000303889
Original member Current member EBI ENST00000439785.5 ENSP00000403441.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000439785.5Link to Ensembl Protein Viewer:ENSP00000403441.1Re-query CCDS DB by Nucleotide ID:ENST00000439785Re-query CCDS DB by Protein ID:ENSP00000403441
Original member Current member NCBI NM_001099437.2 NP_001092907.1 Accepted alive Link to Nucleotide Sequence:NM_001099437.2Link to Protein Sequence:NP_001092907.1Re-query CCDS DB by Nucleotide ID:NM_001099437Re-query CCDS DB by Protein ID:NP_001092907Link to BLAST:NP_001092907.1
Original member Current member NCBI NM_001099438.2 NP_001092908.1 Accepted alive Link to Nucleotide Sequence:NM_001099438.2Link to Protein Sequence:NP_001092908.1Re-query CCDS DB by Nucleotide ID:NM_001099438Re-query CCDS DB by Protein ID:NP_001092908Link to BLAST:NP_001092908.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001092907.1 624 P17039-2 624 100% 0 0
NP_001092908.1 624 P17039-2 624 100% 0 0

Chromosomal Locations for CCDS 46044.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 34929948 34929956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34931843 34931993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34933625 34933723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34943223 34944838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1875 nt):
ATGGCCCATAAATATGTGGGTTTGCAGTATCACGGATCAGTGACATTTGAGGATGTGGCCATAGCCTTCT
CCCAGCAGGAGTGGGAGAGTCTGGACTCTTCCCAGAGGGGCTTGTACAGAGATGTGATGTTGGAGAACTA
CAGGAACTTGGTGTCAATGGCAGGACATTCCCGTTCTAAACCACATGTGATCGCCTTATTGGAACAATGG
AAAGAGCCTGAAGTGACAGTGAGGAAAGATGGAAGAAGATGGTGCACAGATTTGCAGTTGGAAGATGATA
CAATCGGCTGTAAAGAAATGCCCACCTCTGAAAACTGTCCATCTTTTGCTCTACATCAGAAAATAAGTAG
ACAGAAACCACGTGAATGTCAGGAATATGGAAAGACCCTTTGTCAAGACTCAAAGCCTGTTCAACATGAA
AGAATACATAGTAGTGAAAAACCCAACAGATGTAAAGAATGTGGGAAGAACTTTAGTAATGGACATCAAC
TCACCATACATCAGAGATTGCATGTTGGTGAGAAACCCTATAAATATGAAAAATGTGGGAAGGCCTTTAT
CAGTGGCTCAGCCTTTGTTAAGCATGGGAGAATTCACACTGGTGAGAAGCCACTCAAATGTAAGCAATGT
GGAAAGACTATTAGTGGTAGCTATCAACTTACAGTACATAAGAGTATTCATACTGGGAAGAAACCATATG
AGTGCGGGGAATGTGGGAAAGCTTTTCTAGTATATGGAAAGCTTACCCGGCATCAGAGTACTCACACTGG
TGAAAAACCCTTTGGGTGTGAGGAGTGTGGGAAGGCCTTCAGTACCTTTTCATACCTGGTTCAACATCAG
CGAATTCATACCAGTGAAAAACCTTACGAATGCAAAGAATGTGGGAAGGCCTTTAGCACTAGCTCACCCC
TTGCTAAGCATCAGAGAATTCATACTGGCGAGAAACCCTATGAATGTAAGGAGTGTGGGAAGTCCTTCAC
TGTGTATGGACAGCTTACTCGACATCAGAGTATTCATACTGGTGAGAAACCTTTTGAATGTAAGGAATGT
GGAAAGGCCTTTAGACTTAGTTCCTTCCTTCATGCACATCAGCGAATTCATGCAGAGATAAAGCCCTACG
GATGCAAGGAATGCGGGAGAACCTTCAGTCGTGCCTCATATCTTGTTCAACATGGAAGACTTCACACTGG
CGAGAAGCCCTATGAATGTAAGGAGTGTGGCAAGGCCTTTAGTACTGGCTCATACCTTGTTCAGCATCAG
AGGATCCATACTGGGGAGAAACCCTATGAATGTAAGGAATGTGGCAAAGCCTTTATTAGTCGCCATCAGC
TTACCGTACATCAAAGGGTTCATACTGGAGAGAAACCCTATGAGTGTAAGGAATGTGGCAAGGCCTTCAG
AGTGCACGTACATCTCACACAGCATCGGAAAATTCATACTGATGTAAAGCCCTATGAATGTAAGGAATGT
GGAAAGACTTTTAGTCGAGCCTCGTACCTTGTACAACATAGCAGAATCCATACTGGTAAGAAGCCCTATG
AGTGTAAGGAGTGTGGCAAGGCCTTCAGTTCTGGCTCATACCTTGTTCAGCATCAAAGAATTCATACTGG
GGAGAAACCCTATGAATGTAACAAATGTGGGAAAGCCTTTACTGTTTATGGACAACTTATTGGACATCAG
AGTGTTCACACTGGTGAGAAACCTTTTGAATGTAAGGAATGCGGGAAGGCCTTTAGACTTAATTCATTCC
TTACTGAACATCAGCGGGTACACACTGGTGAGAAACCCTTTAAATGCAAAAAATGTGGGAAGACCTTTAG
ATACAGTTCAGCCCTTAAAGTGCATCTGAGAAAACATATGAGTGTTATACCCTAA

Translation (624 aa):
MAHKYVGLQYHGSVTFEDVAIAFSQQEWESLDSSQRGLYRDVMLENYRNLVSMAGHSRSKPHVIALLEQW
KEPEVTVRKDGRRWCTDLQLEDDTIGCKEMPTSENCPSFALHQKISRQKPRECQEYGKTLCQDSKPVQHE
RIHSSEKPNRCKECGKNFSNGHQLTIHQRLHVGEKPYKYEKCGKAFISGSAFVKHGRIHTGEKPLKCKQC
GKTISGSYQLTVHKSIHTGKKPYECGECGKAFLVYGKLTRHQSTHTGEKPFGCEECGKAFSTFSYLVQHQ
RIHTSEKPYECKECGKAFSTSSPLAKHQRIHTGEKPYECKECGKSFTVYGQLTRHQSIHTGEKPFECKEC
GKAFRLSSFLHAHQRIHAEIKPYGCKECGRTFSRASYLVQHGRLHTGEKPYECKECGKAFSTGSYLVQHQ
RIHTGEKPYECKECGKAFISRHQLTVHQRVHTGEKPYECKECGKAFRVHVHLTQHRKIHTDVKPYECKEC
GKTFSRASYLVQHSRIHTGKKPYECKECGKAFSSGSYLVQHQRIHTGEKPYECNKCGKAFTVYGQLIGHQ
SVHTGEKPFECKECGKAFRLNSFLTEHQRVHTGEKPFKCKKCGKTFRYSSALKVHLRKHMSVIP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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