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Report for CCDS36916.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36916.1 Public Mus musculus 14 Zfp219 23 108 98 CCDS HistoryNCBI Gene:69890Re-query CCDS DB by CCDS ID:36916.1Re-query CCDS DB by GeneID:69890See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36916.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000067549.14 ENSMUSP00000068184.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000067549.14Link to Ensembl Protein Viewer:ENSMUSP00000068184.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000067549Re-query CCDS DB by Protein ID:ENSMUSP00000068184
Original member Current member EBI ENSMUST00000166169.3 ENSMUSP00000126854.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000166169.3Link to Ensembl Protein Viewer:ENSMUSP00000126854.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000166169Re-query CCDS DB by Protein ID:ENSMUSP00000126854
Original member Current member EBI ENSMUST00000226522.1 ENSMUSP00000154709.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000226522.1Link to Ensembl Protein Viewer:ENSMUSP00000154709.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000226522Re-query CCDS DB by Protein ID:ENSMUSP00000154709
Original member Current member NCBI NM_001253694.1 NP_001240623.1 Accepted alive Link to Nucleotide Sequence:NM_001253694.1Link to Protein Sequence:NP_001240623.1Re-query CCDS DB by Nucleotide ID:NM_001253694Re-query CCDS DB by Protein ID:NP_001240623Link to BLAST:NP_001240623.1
Original member Current member NCBI NM_001253695.1 NP_001240624.1 Accepted alive Link to Nucleotide Sequence:NM_001253695.1Link to Protein Sequence:NP_001240624.1Re-query CCDS DB by Nucleotide ID:NM_001253695Re-query CCDS DB by Protein ID:NP_001240624Link to BLAST:NP_001240624.1
Original member Current member NCBI NM_027248.2 NP_081524.2 Accepted alive Link to Nucleotide Sequence:NM_027248.2Link to Protein Sequence:NP_081524.2Re-query CCDS DB by Nucleotide ID:NM_027248Re-query CCDS DB by Protein ID:NP_081524Link to BLAST:NP_081524.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001240623.1 726 Q6IQX8 726 100% 0 0
NP_001240624.1 726 Q6IQX8 726 100% 0 0
NP_081524.2 726 Q6IQX8 726 100% 0 0

Chromosomal Locations for CCDS 36916.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 52006540 52007147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52007364 52007495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52008228 52009662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52009970 52009975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2181 nt):
ATGGAGGGCTCACGTCCCCGCATCCTGGTCGGCCACCTAGAGCCTTCCCCACCAGCCTTCGACGGCGAGC
TGGATCTGCAGCGCTACTCCAACGGACCAGGTGTCAGTGGGACTCCAGGACCCGGCTCGCCTGGGATGGG
AGCAGTGGGTTGGTCTGAGACTCGTGCAGGCGAACGGCGCTTCCCTTGTCCTGTGTGCGGAAAGCGCTTC
CGATTCAATTCCATCTTGGCTTTGCACCTGAGAGCCCACCCGGGCGCCCAAGCCTTCCAGTGCCCACATT
GCGGCCACCGCGCAGCGCAGCGGGCTCTGCTGCGCTCACACCTCCGAACGCACCAGCCGGAGCGTCCACG
CAGCCCTGCTGCACGGCTGTTGCTGGAGTTGGAGGAACGCGCCCTGCTTCGCGAAGCCCGACTCGGGAGA
GCCAGAAGCTCAGGCGGCATGCAGTCCAGCCCTGCCGCAGAGGGCCTGGCTCGCCCTCAGGTCCCTTCCT
CATCTGCCTTCCGTTGCCCTTTCTGCAAAGGCAAGTTTCGCACCTCAGCGGAGCGGGAACGCCACCTGCA
TATCCTGCACAGGCCCTGGAAGTGCAGCTTGTGCAGTTTTGGCTCCAGCCAGGAGGAGGAGTTGCTGCAC
CACAGTCTGACGGCCCACGGGGCTTCCGAGCGCCCCCTGGCGGCTACATCTACGCCTGAACCCCCGCCTC
CACCCCAGCAAGAACCCAGATCTGCCCTTGAGCCTGAGCCTGAGCCTGAACCTAGGCCAGAGCCTGACCG
GGAGGCAAACCCTGCCCCAACTCCTGCACCTCCGGAGGAGCCCCCTGCGCCACCTGAATTCCGTTGCCAG
GTGTGCGGCCAGAGCTTTACACAGTCCTGGTTTCTCAAGGGTCACATGCGCAAGCACAAGGCCTCCTTTG
ATCATGCGTGCCCCGTATGTGGTCGCTGCTTCAAGGAGCCCTGGTTCCTTAAGAACCACATGAAGGTGCA
CACCAGCAAGCTGGGTCCTTTGCGTGCTCCAGGCCCTGGCTCTGCACCTGCCAGGGCCCCTCAGCCTCCC
GACCTGAGCCTACTGGCATATGAGCCACTGGGCCCTGCACTCCTCCTGGCCCCAGCACCCGCTCCGGCTG
AGCGCCGAGAGCCCCCAAGCCTCTTAGGCTACCTGAGTGTACGAGCTGGGGAAGTACGACCCAATGGTGA
GGGTGCTGACCCTGGAGGTGGCCGAAGCTATGGAGGGTTCCGCCCACTGCCTTCAGCTCTTCCCAACCGG
GCTCGGCGACACCGTACAGAGGAACCAGAAGAGGAAGAAGAAGTGGTGGAGGCTGAAGAGGAGAGCTGGG
CCCGAGGCAGGTCGCTGGGCTCTCTGACTTCCCTGCACCCCAACCCAGGTGAGGGGTCAGGACAGCCTGC
ACCTGCCGCGGGGACCCAGGCGAGATCCACGGCCACCCAAGAAGAAAACGGGCTGCTGGTTGGAGGGACA
CGATCTGAAGCGGGCCGTGGGGCCACTGGCAAGGACTGCCCCTTCTGTGGAAAATCTTTCCGCTCGGCGC
ATCACTTAAAAGTGCATCTCCGTGTGCACACAGGTGAGCGTCCCTACAAGTGTCCACACTGCGACTATGC
AGGTACCCAGTCGGGCTCGCTCAAGTATCACCTTCAGCGTCACCACCGAGAGCAGAGGAGCAGTGCGGGT
CCTGGGCCTCCCCCAGAACCCCCGCCACCTTCCCAGCGGGGCTCACTGCAGCCGCAGTCAGGAGCCAAGC
CAACTCAGGCCTCAGCCACCTGGGTAGAGGGCACTGCAAGTACCCGGCCTCCTTCGAGCAGCACCGGACC
AGGGTCCCGTAGGAAGCCTGCTAGCCCTGGGAGGACCCTGCGAAACGGGCGAGGTGGTGAAGCCGAACCC
CTGGACCTGTCCCTACGGGCGGGCCCGGGAGGTGAGGCCGGGGCAGGGGGTGCCCTTCACCGCTGCCTCT
TCTGCCCCTTTGCCACTGGAGCTCCTGAGCTCATGGCCTTGCATCTGCAAGTACACCATAGCCGTCGTGC
TCGGGGCCGCCGGCAGCCCCGAGCCGACACGTCTCCAACCTATGTCCGGGCACCATCAGGAGAGACCCCT
CCCAGTCCTCCACTAGAAGAGGAGGGCAGCCCAGGGCTGTCTAGATCCGGAGAGGCAGGTCTTGGGGGGC
AAGAACGGTAG

Translation (726 aa):
MEGSRPRILVGHLEPSPPAFDGELDLQRYSNGPGVSGTPGPGSPGMGAVGWSETRAGERRFPCPVCGKRF
RFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREARLGR
ARSSGGMQSSPAAEGLARPQVPSSSAFRCPFCKGKFRTSAERERHLHILHRPWKCSLCSFGSSQEEELLH
HSLTAHGASERPLAATSTPEPPPPPQQEPRSALEPEPEPEPRPEPDREANPAPTPAPPEEPPAPPEFRCQ
VCGQSFTQSWFLKGHMRKHKASFDHACPVCGRCFKEPWFLKNHMKVHTSKLGPLRAPGPGSAPARAPQPP
DLSLLAYEPLGPALLLAPAPAPAERREPPSLLGYLSVRAGEVRPNGEGADPGGGRSYGGFRPLPSALPNR
ARRHRTEEPEEEEEVVEAEEESWARGRSLGSLTSLHPNPGEGSGQPAPAAGTQARSTATQEENGLLVGGT
RSEAGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSSAG
PGPPPEPPPPSQRGSLQPQSGAKPTQASATWVEGTASTRPPSSSTGPGSRRKPASPGRTLRNGRGGEAEP
LDLSLRAGPGGEAGAGGALHRCLFCPFATGAPELMALHLQVHHSRRARGRRQPRADTSPTYVRAPSGETP
PSPPLEEEGSPGLSRSGEAGLGGQER


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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