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Report for CCDS11104.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11104.1 Public Homo sapiens 17 TMEM102 24 110 108 CCDS HistoryNCBI Gene:284114Re-query CCDS DB by CCDS ID:11104.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11104.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000323206.2 ENSP00000315387.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000323206.2Link to Ensembl Protein Viewer:ENSP00000315387.1Re-query CCDS DB by Nucleotide ID:ENST00000323206Re-query CCDS DB by Protein ID:ENSP00000315387
Original member Current member EBI ENST00000396568.1 ENSP00000379815.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396568.1Link to Ensembl Protein Viewer:ENSP00000379815.1Re-query CCDS DB by Nucleotide ID:ENST00000396568Re-query CCDS DB by Protein ID:ENSP00000379815
Original member Current member NCBI NM_001320444.1 NP_001307373.1 Accepted alive Link to Nucleotide Sequence:NM_001320444.1Link to Protein Sequence:NP_001307373.1Re-query CCDS DB by Nucleotide ID:NM_001320444Re-query CCDS DB by Protein ID:NP_001307373Link to BLAST:NP_001307373.1
Original member Current member NCBI NM_178518.3 NP_848613.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178518.3Link to Protein Sequence:NP_848613.1Re-query CCDS DB by Nucleotide ID:NM_178518Re-query CCDS DB by Protein ID:NP_848613Link to BLAST:NP_848613.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307373.1 508 Q8N9M5 508 100% 0 0
NP_848613.1 508 Q8N9M5 508 100% 0 0

Chromosomal Locations for CCDS 11104.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 7435872 7436085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7436194 7437506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1527 nt):
ATGGCTTCCGCAGTCTGGGGGAGTGCCCCCTGGTGGGGCCCGCCGCCCCCGGCCCCAGCTCGGCCGCTCA
CGGACATCGACTTCTGCTCCGGGGCGCAGCTGCAGGAATTGACCCAGCTGATCCAGGAGCTGGGTGTGCA
GGAGAGCTGGAGTGACGGGCCCAAGCCGGGAGCCGATCTCCTCCGGGCCAAGGACTTTGTCTTCTCTTTG
CTTGGTCTAGTTCACCGCCGGGACCCTCGCTTTCCTCCCCAGGCAGAGCTCTTGCTGCTTCGTGGTGGGA
TTCGCGAGGGCTCCCTGGATCTGGGGCATGCACCCCTGGGTCCCTACGCCCGGGGACCTCACTACGATGC
CGGCTTCACACTCCTAGTGCCCATGTTTTCACTGGACGGCACTGAACTGCAACTGGACCTGGAATCCTGT
TACGCACAGGTCTGCCTCCCAGAGATGGTGTGCGGAACCCCCATCCGGGAGATGTGGCAGGATTGCTTAG
GACCCCCAGTCCCAGGAGCACGTGATTCGATCCACCGAACGGAGAGCGAAGAAAGTTCCAAGGACTGGCA
AAGCTCTGTAGACCAGCCGCACAGCTACGTCACTGAGCACGAGGCGCCGGTGTCTTTGGAAAAATCGCCT
AGTGACGTTTCAGCGTCCGAGTCGCCTCAGCATGACGTCGTCGACCTTGGCTCTACCGCACCTTTGAAAA
CAATGAGTAGTGACGTCACCAAGGCAGCCGTCGAAAGCCCAGTCCCAAAGCCGTCGGAGGCTCGGGAAGC
GTGGCCCACATTATGTTCCGCCCAGGTGGCTGCCTGGTTCTTTGCTACGCTGGCGGCGGTCGCCGAGTCT
CTGATCCCTGTCCCGGGTGCTCCGCGTCTGGTGCACGCAGCTCGCCACGCGGGTTTCACCACCGTCCTCC
TGGCTACCCCTGAGCCCCCTCGCCGCCTCCTGCTCTTCGACCTGATCCCAGTGGTGTCCGTGGCGGGCTG
GCCCGAGGGGGCTCGGAGCCACTCGTGGGCCGGTCCGCTGGCCTCTGAGTCGGCTTCCTTCTACCTGGTG
CCCGGTGGCGGCACCGAGCGGCCGTGCGCCTCCGCCTGGCAGCTCTGTTTTGCCCGCCAGGAGCTGGCGC
TCAAAGCGCGCATACCAGCGCCGCTGCTGCAGGCGCACGCGGCGGCCCAGGCGCTACTGCGCCCGCTGGT
GGCCGGGACCCGGGCGGCGGCGCCCTACCTCCTGCGGACGCTGCTGTACTGGGCGTGCGAGCGGCTGCCT
GCGCTCTACCTGGCGCGGCCAGAAAATGCGGGCGCCTGCTGCCTCGGGCTGCTAGACGAGCTCGGCCGAG
TGCTCGAGGCCGGGACGTTGCCTCACTATTTTCTGAACGGCCGACAGCTCCGTACGGGGGACGACTCCGC
TGCGCTGCTCGGAGAATTGGCCCGGCTCCGCGGGGACCCGGCCCGGGCCCTCCGTGCCGCGGTGGAGGAG
GCCAAAGTGGCCCGCAAGGGGGGCGGTTTGGCGGGCGTGGGGGGCGGGGCCCATTAA

Translation (508 aa):
MASAVWGSAPWWGPPPPAPARPLTDIDFCSGAQLQELTQLIQELGVQESWSDGPKPGADLLRAKDFVFSL
LGLVHRRDPRFPPQAELLLLRGGIREGSLDLGHAPLGPYARGPHYDAGFTLLVPMFSLDGTELQLDLESC
YAQVCLPEMVCGTPIREMWQDCLGPPVPGARDSIHRTESEESSKDWQSSVDQPHSYVTEHEAPVSLEKSP
SDVSASESPQHDVVDLGSTAPLKTMSSDVTKAAVESPVPKPSEAREAWPTLCSAQVAAWFFATLAAVAES
LIPVPGAPRLVHAARHAGFTTVLLATPEPPRRLLLFDLIPVVSVAGWPEGARSHSWAGPLASESASFYLV
PGGGTERPCASAWQLCFARQELALKARIPAPLLQAHAAAQALLRPLVAGTRAAAPYLLRTLLYWACERLP
ALYLARPENAGACCLGLLDELGRVLEAGTLPHYFLNGRQLRTGDDSAALLGELARLRGDPARALRAAVEE
AKVARKGGGLAGVGGGAH


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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