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Report for CCDS21687.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21687.1 Public Mus musculus 7 Or2d36 23 108 98 CCDS HistoryNCBI Gene:258597Re-query CCDS DB by CCDS ID:21687.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21687.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098137.2 ENSMUSP00000095740.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098137.2Link to Ensembl Protein Viewer:ENSMUSP00000095740.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000098137Re-query CCDS DB by Protein ID:ENSMUSP00000095740
Original member Current member EBI ENSMUST00000214819.2 ENSMUSP00000149362.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000214819.2Link to Ensembl Protein Viewer:ENSMUSP00000149362.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000214819Re-query CCDS DB by Protein ID:ENSMUSP00000149362
Original member Current member EBI ENSMUST00000213367.2 ENSMUSP00000150131.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213367.2Link to Ensembl Protein Viewer:ENSMUSP00000150131.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000213367Re-query CCDS DB by Protein ID:ENSMUSP00000150131
Original member Current member EBI ENSMUST00000216871.2 ENSMUSP00000150175.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000216871.2Link to Ensembl Protein Viewer:ENSMUSP00000150175.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000216871Re-query CCDS DB by Protein ID:ENSMUSP00000150175
Original member Current member EBI ENSMUST00000215284.2 ENSMUSP00000150710.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000215284.2Link to Ensembl Protein Viewer:ENSMUSP00000150710.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000215284Re-query CCDS DB by Protein ID:ENSMUSP00000150710
Original member Current member NCBI NM_146604.2 NP_666815.1 Accepted alive Link to Nucleotide Sequence:NM_146604.2Link to Protein Sequence:NP_666815.1Re-query CCDS DB by Nucleotide ID:NM_146604Re-query CCDS DB by Protein ID:NP_666815Link to BLAST:NP_666815.1

Chromosomal Locations for CCDS 21687.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 107147318 107148262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGGGAAGAGAAAACCAGAGCTTTGTAGATGAATTTGTGTTGCTGGGCCTTTCGCAAGATGCACAGACTC
AGATCCTCCTGTTTGTCCTTTTCTTCATCGTTTACATTCTGACTGTACTTGGAAACCTGCTCATCATTGT
CCTCATCCTCATGGATTCTCGACTCCACACCCCCATGTACTTTTTTCTTAGAAATCTTTCTTTTGCAGAT
CTCTGTTTCTCAAATAGCATTGTTCCTCAAGTGCTGTCCCACTTCCTGGTAAAAAGGAAAACTATTTCCT
TTTGGGGCTGTGTGACACAGGTAATTGTCTCCCTTCAGATTGGGTGTACAGAGTGTGCACTGCTGGCGGT
GATGTCCTATGACCGCTATGTGGCTGTGTGCAAACCACTGCACTACTCCACCATCATGACCCAACAACTA
TGCCTGCAGTTGGCCCTAGGGTCCTGGGCCAGTGGGCTCCTAGTATGTTTGGTAGATATTGCTGTTGCTT
TCCATCTTCCCTATCGAGGGCAGAACATAGTCAGCCATTACTTTTGTGAACTTCCTGCACTTCTGAAGGT
GGCTTCAGCAGATACTTACAGCACAGAAATGGCCATCTTTGCAATGGGTGTGGTAATCCTCCTAGCACCT
GTCTCCCTCATCCTCATCTCCTACTGGAACATCATATCCACTGTGATCCAGATGCAGTCTGGAGAGGGGA
GACTCAAGGTGTTCTCAACCTGTGGATCTCACCTCATTGTTGTTGTCCTCTTCTATGGGTCTGCAATATT
TAACTATATGCAGCCAAACACCAAAACTAGGAAGAAACAGGATAAGATAATGTCTGTGTTCTATACAGTG
GTGACTCCAATGCTAAACCCCATAATTTATAGTCTTCGGAACAAGGATGTCAAAAGTGCCTTCAGGAAAC
TAGCTGCAAGAGTGGTATTCTTTCGAAAGCAATGA

Translation (314 aa):
MGRENQSFVDEFVLLGLSQDAQTQILLFVLFFIVYILTVLGNLLIIVLILMDSRLHTPMYFFLRNLSFAD
LCFSNSIVPQVLSHFLVKRKTISFWGCVTQVIVSLQIGCTECALLAVMSYDRYVAVCKPLHYSTIMTQQL
CLQLALGSWASGLLVCLVDIAVAFHLPYRGQNIVSHYFCELPALLKVASADTYSTEMAIFAMGVVILLAP
VSLILISYWNIISTVIQMQSGEGRLKVFSTCGSHLIVVVLFYGSAIFNYMQPNTKTRKKQDKIMSVFYTV
VTPMLNPIIYSLRNKDVKSAFRKLAARVVFFRKQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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