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Report for CCDS6889.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6889.1 Public Homo sapiens 9 NAIF1 24 110 108 CCDS HistoryNCBI Gene:203245Re-query CCDS DB by CCDS ID:6889.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6889.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373078.5 ENSP00000362170.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373078.5Link to Ensembl Protein Viewer:ENSP00000362170.4Re-query CCDS DB by Nucleotide ID:ENST00000373078Re-query CCDS DB by Protein ID:ENSP00000362170
Original member Current member NCBI NM_197956.4 NP_931045.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_197956.4Link to Protein Sequence:NP_931045.1Re-query CCDS DB by Nucleotide ID:NM_197956Re-query CCDS DB by Protein ID:NP_931045Link to BLAST:NP_931045.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_931045.1 327 Q69YI7-1 327 100% 0 0

Chromosomal Locations for CCDS 6889.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 128063428 128063900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128066591 128067101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (984 nt):
ATGGCCGTCCCAGCCAAGAAAAGGAAGATGAACTTCTCAGAGCGGGAGGTGGAGATCATCGTGGAGGAGC
TGGAGCTGAAGAAGCACCTGCTGGTGAACCACTTCAACGCCGGGGTACCCCTGGCCGCCAAGAGTGCGGC
CTGGCACGGCATCCTGAGAAGGGTCAACGCCGTGGCCACCTGCCGCAGAGAGCTGCCTGAGGTCAAGAAG
AAGTGGTCTGACCTCAAGACCGAGGTCCGTCGCAAGGTTGCCCAGGTCCGGGCCGCCGTGGAGGGTGGTG
AGGCGCCGGGGCCCACTGAGGAGGACGGAGCTGGGGGGCCTGGGACAGGCGGTGGCAGTGGTGGCGGTGG
CCCAGCTGTAGCCCCAGTGCTGCTGACCCCCATGCAACAACGTATCTGCAACCTGCTGGGCGAGGCCACC
ATCATCAGCCTGCCCAGCACCACAGAGATCCACCCTGTGGCCCTCGGACCCTCGGCCACCGCAGCCGCAG
CCACGGTCACCCTGACACAGATCCCCACAGAGACCACCTATCACACGCTGGAGGAGGGCGTGGTGGAGTA
CTGCACGGCTGAGGCGCCCCCACCTCTGCCACCAGAGACCCCTGTGGACATGATGGCCCAGCATGCAGAC
ACGTCGGTCAAGCCGCAAGCGCTCAAGAGCCGCATTGCTCTCAACTCCGCCAAGCTGATACAGGAGCAGC
GGGTCACCAACCTGCATGTGAAGGAGATCGCACAGCACCTGGAACAGCAGAACGACCTACTGCAGATGAT
CCGCCGCTCCCAGGAAGTGCAGGCCTGTGCCCAGGAGCGCCAGGCCCAGGCCATGGAGGGCACACAGGCT
GCCCTGAGCGTCCTCATCCAGGTCCTCCGGCCTATGATCAAAGATTTCCGCCGCTACCTGCAGAGCAACA
CAGCTAACCCGGCCCCCGCCTCTGACCCTGGGCAGGTGGCCCAGAATGGGCAGCCAGACAGCATCATCCA
GTGA

Translation (327 aa):
MAVPAKKRKMNFSEREVEIIVEELELKKHLLVNHFNAGVPLAAKSAAWHGILRRVNAVATCRRELPEVKK
KWSDLKTEVRRKVAQVRAAVEGGEAPGPTEEDGAGGPGTGGGSGGGGPAVAPVLLTPMQQRICNLLGEAT
IISLPSTTEIHPVALGPSATAAAATVTLTQIPTETTYHTLEEGVVEYCTAEAPPPLPPETPVDMMAQHAD
TSVKPQALKSRIALNSAKLIQEQRVTNLHVKEIAQHLEQQNDLLQMIRRSQEVQACAQERQAQAMEGTQA
ALSVLIQVLRPMIKDFRRYLQSNTANPAPASDPGQVAQNGQPDSIIQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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