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Report for CCDS19386.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19386.1 Public Mus musculus 5 Ugt2b37 23 108 98 CCDS HistoryNCBI Gene:112417Re-query CCDS DB by CCDS ID:19386.1Re-query CCDS DB by GeneID:112417See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 19386.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000075858.3 ENSMUSP00000075255.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000075858.3Link to Ensembl Protein Viewer:ENSMUSP00000075255.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000075858Re-query CCDS DB by Protein ID:ENSMUSP00000075255
Original member Current member NCBI NM_053215.3 NP_444445.2 Accepted alive Link to Nucleotide Sequence:NM_053215.3Link to Protein Sequence:NP_444445.2Re-query CCDS DB by Nucleotide ID:NM_053215Re-query CCDS DB by Protein ID:NP_444445Link to BLAST:NP_444445.2

Chromosomal Locations for CCDS 19386.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 87240760 87241039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87242273 87242492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87242914 87243001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87250571 87250702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87251775 87251923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87254047 87254770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1593 nt):
ATGCCTGGAAAGTGGATTTCTGCTCTGTTGCTGCTGCAGATAAGTTGCTGCTTCAGATCTGTGAAATGTG
GGAAAGTGTTGGTGTGGCCGATGGAATTCAGTCATTGGATGAACATAAAAATAATACTGGATGAACTGGT
ACAGAGGGGCCATGAAGTCACTGTTCTGAGACCTTCAGCTTACTATGTTCTTGATCCCAAAAAATCACCT
GGCCTTAAGTTTGAAACTTTTCCTACATCTGTCACTAAAGATGATCTGGAAAATTTTTTCATACAGCTTT
TGAATGTGTGGACTTATGAGTTGTCAAGAGATACATGTTTGTCATATTCTCCTTTAATGCAAAATATGTT
TGATGAATTATCTGGTTATTATCTAAGTCTTTGTAAAGATGTCGTTTCAAACAGACAGCTCATGACAAAG
CTACAGGAATCAAAGTTTGATGTCCTTTTGTCAGATCCTGTTGCTTTTGGTGGGGAGCTAATCGCTGAAT
TGCTCCACATACCTTTTCTGTACAGTCTTCGCTTCACTGCAGGTTACAGAATTGAAAAATCCAGTGGAAG
ATTTCTACTACCTCCCTCTTATGTGCCTGTTATTCTGTCAGGATTAGGTGGACAAATGACATTCATAGAG
AGAGTAAAAAATATGATATGCATGCTTTATTTTGACTTTTGGTTCCAGATGCCTAATGATAAGAAATGGG
ATTCATTTTACACTGAATATTTGGGAAGGCCCACCACCTTAGCTGAGACAATGGGCCAAGCAGAAATGTG
GCTCATTAGATCCAACTGGGATTTGGAGTTTCCTCACCCGACCTTACCAAATGTTGACTATGTTGGAGGA
CTCCACTGCAAACCTGCTAAACCTTTGCCTAAGGATATGGAAGAATATGTCCAGAGCTCTGGAGACCATG
GTGTAGTGGTCTTTTCTCTTGGGTCAATGGTTAGTAACATCACAGAAGAAAAAGTCAACGCAATTGCATG
GGCCCTTGCCCAGATTCCACAAAAGGTTCTTTGGAAATTTGATGGCAAAACCCCAGCAACTTTAGGACAC
AATACAAGAGTGTACAAGTGGCTCCCCCAGAATGACCTCCTTGGTCATCCAAAAACCAAAGCCTTTATAA
CTCATGGTGGGGCCAACAGTGTCTATGAGGCAATCTATCATGGAATCCCTATGATTGGCATTCCTTTGTT
TGGAGAACAGCATGATAACATTGCCCATATGGTGGCCAAAGGAGCAGCTGTTACATTGAATATCAGAACA
ATGTCAAGGTCAGATGTGCTCAATGCACTGGAGGAAGTCATAGAAAATCCTTTCTATAAAAAGAATGCTA
TGTGGTTGTCAACCATTCACCATGACCAGCCTATGAAACCCCTGGACAGGGCTGTATTCTGGGTTGAGTT
TGTCATGCGCCACAAAAATGCTAAGCACTTGAGGCCACTTGGACATAACCTTACCTGGTACCAGTACCAC
TCTCTGGATGTGATTGGATTCCTACTCGCTTGTGTGGCAGCCACTGTAGTTCTTACTGTAAAGTGCCTCT
TGTTCATTTACCGATTCTTTGTAACGAAAAAAAAGAAAATGAAGAATGAGTAG

Translation (530 aa):
MPGKWISALLLLQISCCFRSVKCGKVLVWPMEFSHWMNIKIILDELVQRGHEVTVLRPSAYYVLDPKKSP
GLKFETFPTSVTKDDLENFFIQLLNVWTYELSRDTCLSYSPLMQNMFDELSGYYLSLCKDVVSNRQLMTK
LQESKFDVLLSDPVAFGGELIAELLHIPFLYSLRFTAGYRIEKSSGRFLLPPSYVPVILSGLGGQMTFIE
RVKNMICMLYFDFWFQMPNDKKWDSFYTEYLGRPTTLAETMGQAEMWLIRSNWDLEFPHPTLPNVDYVGG
LHCKPAKPLPKDMEEYVQSSGDHGVVVFSLGSMVSNITEEKVNAIAWALAQIPQKVLWKFDGKTPATLGH
NTRVYKWLPQNDLLGHPKTKAFITHGGANSVYEAIYHGIPMIGIPLFGEQHDNIAHMVAKGAAVTLNIRT
MSRSDVLNALEEVIENPFYKKNAMWLSTIHHDQPMKPLDRAVFWVEFVMRHKNAKHLRPLGHNLTWYQYH
SLDVIGFLLACVAATVVLTVKCLLFIYRFFVTKKKKMKNE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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