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Report for CCDS2100.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2100.1 Public Homo sapiens 2 CKAP2L 24 110 108 CCDS HistoryNCBI Gene:150468Re-query CCDS DB by CCDS ID:2100.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2100.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302450.11 ENSP00000305204.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302450.11Link to Ensembl Protein Viewer:ENSP00000305204.6Re-query CCDS DB by Nucleotide ID:ENST00000302450Re-query CCDS DB by Protein ID:ENSP00000305204
Original member Current member NCBI NM_152515.5 NP_689728.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152515.5Link to Protein Sequence:NP_689728.3Re-query CCDS DB by Nucleotide ID:NM_152515Re-query CCDS DB by Protein ID:NP_689728Link to BLAST:NP_689728.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689728.3 745 Q8IYA6-1 745 100% 0 0

Chromosomal Locations for CCDS 2100.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 112738823 112739048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112740818 112741007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112742706 112742769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112746420 112746575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112752267 112752474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112755977 112757214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112760713 112760764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112762503 112762569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112764562 112764598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2238 nt):
ATGGTGGGGCCCGGGCCTACCGCTGCTGCCGCTGTCGAAGAGCGGCAGAGAAAGCTTCAGGAGTACCTTG
CAGCCAAGGGAAAACTGAAGAGCCAAAACACCAAGCCTTATCTAAAATCCAAGAATAATTGCCAGAATCA
ACCACCTTCTAAATCTACTATTAGACCCAAAAATGATGTTACCAACCATGTTGTTTTGCCTGTCAAACCT
AAAAGGTCCATCAGCATTAAACTCCAGCCCAGACCACCTAATACTGCAGGGTCCCAGAAGCCGAAGTTGG
AGCCACCAAAACTTCTGGGCAAAAGGCTGACTTCAGAATGTGTTTCTTCTAACCCATACTCTAAGCCTTC
TAGCAAGAGTTTTCAACAGTGTGAAGCTGGATCGTCCACAACAGGAGAACTGTCAAGAAAACCTGTGGGG
TCACTTAATATAGAGCAATTGAAAACTACAAAGCAGCAGTTAACAGATCAAGGAAATGGTAAATGTATAG
ACTTTATGAATAATATCCATGTTGAAAACGAATCTTTGGATAACTTTCTAAAAGAAACAAACAAAGAGAA
CTTGCTCGATATCTTAACAGAACCTGAGAGGAAGCCAGATCCTAAATTATATACCAGAAGTAAGCCAAAG
ACTGACTCTTATAATCAAACCAAGAACAGTTTAGTTCCTAAACAAGCCTTGGGCAAAAGTTCAGTTAATA
GTGCTGTTCTGAAAGATAGGGTTAATAAACAATTTGTTGGAGAAACACAAAGCAGGACTTTCCCAGTAAA
ATCACAGCAACTCTCTAGAGGAGCAGATCTTGCAAGACCAGGAGTAAAACCCTCAAGGACGGTTCCCTCT
CACTTTATTCGGACCCTTAGTAAAGTTCAGTCATCAAAGAAACCAGTAGTCAAGAACATCAAAGATATAA
AGGTTAATAGGAGTCAATATGAAAGACCAAATGAAACTAAGATACGGTCATACCCTGTTACTGAACAGAG
AGTGAAGCACACCAAACCCAGAACATACCCCAGTTTGCTTCAGGGTGAATATAACAACAGACATCCAAAC
ATCAAGCAAGATCAGAAGTCCAGCCAAGTTTGTATACCTCAGACATCATGTGTACTGCAAAAGTCAAAAG
CCATAAGCCAGAGGCCTAATTTGACAGTTGGCAGATTTAATTCAGCCATTCCAAGCACCCCTAGCATAAG
ACCAAATGGAACCAGTGGTAATAAACATAACAATAATGGCTTTCAGCAAAAAGCACAGACTTTGGACTCC
AAGTTGAAAAAGGCTGTTCCCCAGAACCATTTTCTGAACAAGACAGCTCCCAAAACTCAAGCTGATGTCA
CAACCGTAAATGGGACCCAAACAAACCCAAATATTAAAAAGAAGGCAACAGCAGAGGATCGAAGGAAACA
ACTAGAAGAATGGCAGAAATCTAAGGGAAAAACCTATAAACGGCCTCCTATGGAACTTAAAACAAAAAGA
AAAGTAATAAAGGAAATGAATATTTCATTCTGGAAGAGCATTGAAAAAGAAGAGGAAGAAAAGAAAGCAC
AACTCGAACTGTCCAGTAAAATTAACAACACTCTGACAGAATGTCTGAACCTCATCGAAGGGGGTGTACC
TTCTAATGAAATACTTAACATATTGTCCAGCATTCCTGAAGCTGAAAAATTTGCTAAATTCTGGATCTGC
AAAGCAAAGTTGTTGGCAAGTAAAGGCACCTTTGATGTTATTGGGCTATATGAAGAGGCCATTAAAAATG
GGGCAACACCAATACAAGAGTTGCGGAAAGTTGTTCTTAATATCTTGCAAGACTCAAACAGAACCACAGA
AGGGATTACTTCTGACTCTTTAGTTGCTGAAACTAGTATAACATCAGTGGAAGAGCTGGCCAAGAAGATG
GAATCTGTGAAGTCTTGTCTTTCTCCAAAAGAGAGGGAACAAGTCACGGCGACACCCCGAATAGCCAAGG
CAGAACAGCATAATTATCCTGGTATCAAATTACAGATTGGTCCAATCCCTAGAATAAATGGGATGCCGGA
AGTGCAAGACATGAAATTTATCACTCCTGTACGGCGTTCGTCGAGGATTGAGCGAGCAGTGTCCCGCTAC
CCAGAAATGCTGCAGGAACACGATTTAGTAGTGGCTTCTCTTGATGAACTGTTAGAAGTGGAAGAAACAA
AATGTTTTATATTCCGTAGAAATGAGGCGCTGCCTGTAACATTGGGGTTTCAAACCCCTGAATCATAA

Translation (745 aa):
MVGPGPTAAAAVEERQRKLQEYLAAKGKLKSQNTKPYLKSKNNCQNQPPSKSTIRPKNDVTNHVVLPVKP
KRSISIKLQPRPPNTAGSQKPKLEPPKLLGKRLTSECVSSNPYSKPSSKSFQQCEAGSSTTGELSRKPVG
SLNIEQLKTTKQQLTDQGNGKCIDFMNNIHVENESLDNFLKETNKENLLDILTEPERKPDPKLYTRSKPK
TDSYNQTKNSLVPKQALGKSSVNSAVLKDRVNKQFVGETQSRTFPVKSQQLSRGADLARPGVKPSRTVPS
HFIRTLSKVQSSKKPVVKNIKDIKVNRSQYERPNETKIRSYPVTEQRVKHTKPRTYPSLLQGEYNNRHPN
IKQDQKSSQVCIPQTSCVLQKSKAISQRPNLTVGRFNSAIPSTPSIRPNGTSGNKHNNNGFQQKAQTLDS
KLKKAVPQNHFLNKTAPKTQADVTTVNGTQTNPNIKKKATAEDRRKQLEEWQKSKGKTYKRPPMELKTKR
KVIKEMNISFWKSIEKEEEEKKAQLELSSKINNTLTECLNLIEGGVPSNEILNILSSIPEAEKFAKFWIC
KAKLLASKGTFDVIGLYEEAIKNGATPIQELRKVVLNILQDSNRTTEGITSDSLVAETSITSVEELAKKM
ESVKSCLSPKEREQVTATPRIAKAEQHNYPGIKLQIGPIPRINGMPEVQDMKFITPVRRSSRIERAVSRY
PEMLQEHDLVVASLDELLEVEETKCFIFRRNEALPVTLGFQTPES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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