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Report for CCDS22419.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22419.1 Public Mus musculus 8 F2rl3 23 108 98 CCDS HistoryNCBI Gene:14065Re-query CCDS DB by CCDS ID:22419.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22419.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058099.8 ENSMUSP00000054426.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058099.8Link to Ensembl Protein Viewer:ENSMUSP00000054426.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000058099Re-query CCDS DB by Protein ID:ENSMUSP00000054426
Original member Current member NCBI NM_007975.4 NP_032001.2 Accepted alive Link to Nucleotide Sequence:NM_007975.4Link to Protein Sequence:NP_032001.2Re-query CCDS DB by Nucleotide ID:NM_007975Re-query CCDS DB by Protein ID:NP_032001Link to BLAST:NP_032001.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032001.2 396 O88634 396 100% 0 0

Chromosomal Locations for CCDS 22419.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 72761903 72762014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72762259 72763337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1191 nt):
ATGTGCTGGCCGCTGCTGTATCCTTTGGTGCTGGGGCTCAGCATCAGCCTGGCAGAGGGCATCCAGACCC
CCAGCATCTACGATGATGTAGAGAGTACCAGGGGAAGCCATGAAGGCCCTCTGGGTCCCACAGTAGAACT
CAAGGAGCCGAAGTCCTCAGACAAGCCTAATCCACGAGGCTACCCGGGCAAATTCTGTGCCAACGACAGT
GACACGCTGGAGCTCCCGGCCAGCTCTCAAGCACTGCTGCTGGGGTGGGTCCCCACGAGGCTGGTACCTG
CCCTCTATGGGCTTGTGGTGGCTGTGGGGCTGCCTGCCAATGGGCTGGCGCTGTGGGTGCTGGCCACAAG
GGTGCCACGCCTGCCATCCACCATTCTGCTCATGAACCTGGCAGTGGCTGATCTGCTGTTGGCCCTGGTG
CTGCCACCACGACTGGCTTACCACTTGCGTGGCCAGCGCTGGCCATTTGGTGAGGCTGCCTGCCGGGTGG
CCACAGCTGCCCTCTATGGCCACATGTATGGTTCAGTGTTGCTGCTGGCTGCAGTCAGCTTGGACAGATA
CCTGGCCCTGGTGCATCCTTTGCGGGCCCGTGCACTGCGTGGTCAACGCCTCACTACTGGACTCTGTTTG
GTGGCCTGGCTCTCTGCAGCCACCCTGGCCTTGCCTCTCACTCTGCATCGGCAGACCTTCCGATTAGCTG
GCTCCGATCGCATGCTGTGTCATGATGCGCTGCCCCTGACTGAGCAGACCTCCCACTGGAGACCGGCCTT
CATCTGCCTGGCTGTCCTGGGCTGCTTCGTGCCACTGCTGGCCATGGGCCTGTGCTATGGAGCCACCCTT
CGTGCACTGGCGGCCAATGGCCAGCGCTACAGCCATGCACTCAGACTGACAGCCCTGGTACTGTTCTCGG
CAGTGGCCTCTTTCACACCTAGCAATGTGCTGCTGGTGCTGCACTATTCAAACCCGAGCCCTGAGGCCTG
GGGCAATCTCTATGGAGCCTATGTGCCCAGCCTGGCACTCAGCACCCTCAACAGCTGCGTAGACCCTTTC
ATCTACTACTATGTGTCCCATGAGTTCAGGGAGAAGGTACGCGCTATGTTGTGTCGCCAGCCGGAGGCCA
GCAGCTCCTCTCAGGCCTCCAGGGAGGCTGGAAGCCGAGGGACTGCCATTTGCTCCTCTACACTTCTGTG
A

Translation (396 aa):
MCWPLLYPLVLGLSISLAEGIQTPSIYDDVESTRGSHEGPLGPTVELKEPKSSDKPNPRGYPGKFCANDS
DTLELPASSQALLLGWVPTRLVPALYGLVVAVGLPANGLALWVLATRVPRLPSTILLMNLAVADLLLALV
LPPRLAYHLRGQRWPFGEAACRVATAALYGHMYGSVLLLAAVSLDRYLALVHPLRARALRGQRLTTGLCL
VAWLSAATLALPLTLHRQTFRLAGSDRMLCHDALPLTEQTSHWRPAFICLAVLGCFVPLLAMGLCYGATL
RALAANGQRYSHALRLTALVLFSAVASFTPSNVLLVLHYSNPSPEAWGNLYGAYVPSLALSTLNSCVDPF
IYYYVSHEFREKVRAMLCRQPEASSSSQASREAGSRGTAICSSTLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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