Positioning of ATATA/TATAT

From Table IVa: Position-dependent pentamers: Clustered pentamers
ATATA and/or TATAT
are found in the upstream regions of these
early_g1
yeast genes in the following intervals:

-551 to -600 nt upstream of the ATG start codon
16 elements found in 7 genes

YEL032W	MCM3	component of DNA replication initiator complex

YHR005C	GPA1	alpha subunit of G protein coupled to mating factor receptors

YKL150W	MCR1	NADH-cytochrome b5 reductase

YLR273C	PIG1	Protein similar to Gac1p, a putative type 1 protein phosphatase targeting subunit

YLR395C	COX8	Cytochrome-c oxidase chain VIII

```
YNR016C	ACC1	acetyl-CoA carboxylase
```
```
YOR066W		
```

-501 to -550 nt upstream of the ATG start codon
22 elements found in 5 genes

```
YCL040W	GLK1	Glucokinase
```

YDR368W	YPR1	similar to aldo-keto reductase

YKL150W	MCR1	NADH-cytochrome b5 reductase

YLR079W	SIC1	Cdc28p-Clb5 protein kinase inhibitor

YLR395C	COX8	Cytochrome-c oxidase chain VIII

-451 to -500 nt upstream of the ATG start codon
22 elements found in 8 genes

```
YBR200W	BEM1	contains two SH3 domains
```
```
YCL040W	GLK1	Glucokinase
```
```
YER111C	SWI4	transcription factor
```
```
YIL009W	FAA3	Acyl CoA synthase
```

YJL194W	CDC6	pre-initiation complex component

YLR273C	PIG1	Protein similar to Gac1p, a putative type 1 protein phosphatase targeting subunit

```
YOR264W		
```
```
YPR002W		
```

-401 to -450 nt upstream of the ATG start codon
22 elements found in 11 genes

YBL023C	MCM2	Minichromosome maintenance protein, transcription factor

```
YBR053C		
```

YBR054W	YRO2	Homolog to HSP30 heat shock protein YRO1 (S. cerevisiae) 7

```
YDL181W	INH1	ATPase inhibitor
```
```
YHR022C		RAS-related protein
```

YKL185W	ASH1	probable purine nucleotide-binding protein

```
YLR049C		
```
```
YOR065W	CYT1	Cytochrome c1
```
```
YPL158C		
```
```
YPR002W		
```

YPR019W	CDC54	Involved in initiation of DNA replication

-351 to -400 nt upstream of the ATG start codon
29 elements found in 10 genes

```
YBR053C		
```
```
YBR158W		
```

YBR202W	CDC47	MCM3 protein homolog (S. cerevisiae)

YGR183C	QCR9	7.3 kDa subunit 9 of the ubiquinol cytochrome c oxidoreductase complex

YLL040C	VPS13	component of peripheral vacuolar membrane protein complex

```
YLR049C		
```
```
YNL078W		
```
```
YNR016C	ACC1	acetyl-CoA carboxylase
```
```
YPL158C		
```
```
YPR002W		
```

-301 to -350 nt upstream of the ATG start codon
32 elements found in 10 genes

YBR052C		Homolog to YCR004, obr1 (S. pombe), trp repressor binding protein (E. coli)

YBR054W	YRO2	Homolog to HSP30 heat shock protein YRO1 (S. cerevisiae) 7

```
YBR158W		
```
```
YBR200W	BEM1	contains two SH3 domains
```
```
YDR033W		
```

YGR044C	RME1	zinc finger protein; negative regulator of meiosis; directly repressed by a1-a2 regulator

YLR258W	GSY2	Glycogen synthase (UDP-glucose--starch glucosyltransferase)

```
YNL078W		
```
```
YPL066W		
```

YPR019W	CDC54	Involved in initiation of DNA replication

-251 to -300 nt upstream of the ATG start codon
26 elements found in 11 genes

```
YBR157C		
```
```
YGR281W	YOR1	ABC transporter
```
```
YHL026C		
```

YKL150W	MCR1	NADH-cytochrome b5 reductase

YLR395C	COX8	Cytochrome-c oxidase chain VIII

YMR256C	COX7	subunit VII of cytochrome c oxidase

```
YNR067C		
```

YPL058C	PDR12	multidrug resistance transporter

```
YPL066W		
```
```
YPR002W		
```

YPR019W	CDC54	Involved in initiation of DNA replication

-201 to -250 nt upstream of the ATG start codon
17 elements found in 13 genes

```
YBR158W		
```
```
YDR511W		
```

YGL055W	OLE1	delta-9-fatty acid desaturase

```
YIL009W	FAA3	Acyl CoA synthase
```

YKL185W	ASH1	probable purine nucleotide-binding protein

```
YLR049C		
```
```
YLR050C		
```
```
YLR254C		
```

YLR395C	COX8	Cytochrome-c oxidase chain VIII

YMR256C	COX7	subunit VII of cytochrome c oxidase

```
YNL046W		
```

YNR001C	CIT1	citrate synthase. Nuclear encoded mitochondrial protein.

```
YOR065W	CYT1	Cytochrome c1
```

-151 to -200 nt upstream of the ATG start codon
50 elements found in 18 genes

YBR083W	TEC1	transcription factor of the TEA/ATTS DNA-binding domain family, regulator of Ty1 expression

```
YDR511W		
```

YGL055W	OLE1	delta-9-fatty acid desaturase

```
YGR035C		
```

YGR044C	RME1	zinc finger protein; negative regulator of meiosis; directly repressed by a1-a2 regulator

```
YGR281W	YOR1	ABC transporter
```
```
YHL026C		
```

YHR005C	GPA1	alpha subunit of G protein coupled to mating factor receptors

```
YIL009W	FAA3	Acyl CoA synthase
```
```
YJL157C	FAR1	Cdc28p kinase inhibitor
```

YLL040C	VPS13	component of peripheral vacuolar membrane protein complex

YLR258W	GSY2	Glycogen synthase (UDP-glucose--starch glucosyltransferase)

YMR256C	COX7	subunit VII of cytochrome c oxidase

```
YNL046W		
```

YNR001C	CIT1	citrate synthase. Nuclear encoded mitochondrial protein.

```
YNR067C		
```
```
YOR264W		
```

YPL058C	PDR12	multidrug resistance transporter

-101 to -150 nt upstream of the ATG start codon
44 elements found in 19 genes

```
YBR067C	TIP1	cell wall mannoprotein
```
```
YCL040W	GLK1	Glucokinase
```

YDR368W	YPR1	similar to aldo-keto reductase

```
YER111C	SWI4	transcription factor
```

YGR044C	RME1	zinc finger protein; negative regulator of meiosis; directly repressed by a1-a2 regulator

```
YHL026C		
```
```
YHR022C		RAS-related protein
```
```
YJL157C	FAR1	Cdc28p kinase inhibitor
```

YJL194W	CDC6	pre-initiation complex component

YKL150W	MCR1	NADH-cytochrome b5 reductase

YKL163W	PIR3	Protein containing tandem internal repeats

```
YLR049C		
```

YLR258W	GSY2	Glycogen synthase (UDP-glucose--starch glucosyltransferase)

```
YMR007W		
```
```
YNR067C		
```
```
YOR264W		
```
```
YPL004C		
```

YPL058C	PDR12	multidrug resistance transporter

```
YPL158C		
```

-51 to -100 nt upstream of the ATG start codon
47 elements found in 20 genes

YBR052C		Homolog to YCR004, obr1 (S. pombe), trp repressor binding protein (E. coli)

```
YBR053C		
```
```
YBR200W	BEM1	contains two SH3 domains
```

YBR202W	CDC47	MCM3 protein homolog (S. cerevisiae)

```
YDL117W		
```
```
YDL179W	PCL9	Cyclin
```

YGL055W	OLE1	delta-9-fatty acid desaturase

```
YGR035C		
```
```
YJL157C	FAR1	Cdc28p kinase inhibitor
```

YJL194W	CDC6	pre-initiation complex component

YKL116C		probable serine/threonine-specific protein kinase (EC 2.7.1.-)

```
YLR049C		
```

YLR274W	CDC46	MCM initiator complex protein

```
YMR254C		
```
```
YNL046W		
```
```
YNR016C	ACC1	acetyl-CoA carboxylase
```
```
YOR065W	CYT1	Cytochrome c1
```
```
YOR066W		
```

YPL058C	PDR12	multidrug resistance transporter

```
YPR002W		
```

-1 to -50 nt upstream of the ATG start codon
23 elements found in 15 genes

YBL023C	MCM2	Minichromosome maintenance protein, transcription factor

```
YBR053C		
```
```
YBR200W	BEM1	contains two SH3 domains
```

YDR368W	YPR1	similar to aldo-keto reductase

```
YGR281W	YOR1	ABC transporter
```

YHR005C	GPA1	alpha subunit of G protein coupled to mating factor receptors

YJL194W	CDC6	pre-initiation complex component

YKL150W	MCR1	NADH-cytochrome b5 reductase

```
YLR049C		
```
```
YLR050C		
```
```
YLR254C		
```

YMR256C	COX7	subunit VII of cytochrome c oxidase

YNR001C	CIT1	citrate synthase. Nuclear encoded mitochondrial protein.

```
YPL066W		
```
```
YPL158C		
```

From Table IVa: Position-dependent pentamers: Clustered pentamers ATATA and/or TATAT are found in the upstream regions of these early_g1 yeast genes in the following intervals:

From Table IVa: Position-dependent pentamers: Clustered pentamers
ATATA and/or TATAT
are found in the upstream regions of these
early_g1
yeast genes in the following intervals: