| Early G1 | Late G1 | S | G2 | M | Non-cell cycle regulated | |||||||||
| No. | chi2 score | No. | chi2 score | No. | chi2 score | No. | chi2 score | No. | chi2 score | Total chi2 score | p-value < | No. | 63 | 134 | 74 | 56 | 56 | 5553 |
| Early G1 | CCCCGC | 10 | 18.56 | 5 | 0.15 | 1 | 1.59 | 0 | 2.49 | 1 | 0.89 | 23.67 | 0.200 | 201 |
| Late G1 | ACGCGT | 11 | 1.29 | 66 | 33.34 | 16 | 0.26 | 0 | 13.74 | 1 | 11.82 | 60.44 | 0.001 | 270 |
| AACGCG | 9 | 0.61 | 48 | 21.59 | 11 | 0.54 | 2 | 6.77 | 1 | 8.48 | 37.99 | 0.005 | 362 | |
| CGCGTT | 6 | 2.17 | 42 | 15.48 | 16 | 0.83 | 1 | 7.75 | 1 | 7.75 | 33.99 | 0.005 | 352 | |
| GACGCG | 7 | 0.75 | 41 | 20.08 | 7 | 1.70 | 4 | 2.48 | 0 | 8.63 | 33.64 | 0.005 | 207 | |
| ACGCGA | 3 | 4.19 | 38 | 17.29 | 10 | 0.06 | 5 | 1.24 | 0 | 8.19 | 30.97 | 0.010 | 256 | |
| CGCGTC | 9 | 0.03 | 38 | 15.45 | 9 | 0.43 | 2 | 4.95 | 0 | 8.48 | 29.35 | 0.050 | 197 | |
| CGCGAA | 4 | 3.63 | 38 | 13.00 | 12 | 0.00 | 7 | 0.41 | 0 | 8.92 | 25.97 | 0.100 | 348 | |
| TCGCGT | 5 | 1.48 | 32 | 10.48 | 13 | 0.87 | 1 | 5.73 | 1 | 5.73 | 24.29 | 0.200 | 277 | |
| Early G1, M | CCCTTT | 23 | 8.06 | 13 | 7.48 | 10 | 1.71 | 11 | 0.01 | 21 | 8.07 | 25.34 | 0.150 | 1180 |
Clicking on a hexamer retrieves a list of the genes whose upstream regions contain one or more copies of the hexamer.
A list of the 100 highest scoring hexamers is also available.
The number of upstream regions in each of the five sets of cell cycle regulated genes containing one or more copies of a hexamer was counted The counts are indicated in the column labeled "No." The contribution to the chi2 score made by each of the datasets is shown, along with the total value of the chi2 score. The dataset(s) which make the greatest contribution to chi2 are indicated in bold. p-values for each chi2 score were calculated from a Monte Carlo simulation. The final column shows the number of upstream regions of the non-cell cycle regulated genes containing one or more copies of each hexamer. These counts are shown for illustrative purposes only; the numbers were not included in the chi2 calculation.